Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.54■■□□□ 1.36
CCDC187A0A096LP49 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC187A0A096LP49 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC187A0A096LP49 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC187A0A096LP49 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.53■■□□□ 1.36
CCDC187A0A096LP49 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.53■■□□□ 1.36
CCDC187A0A096LP49 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.53■■□□□ 1.36
CCDC187A0A096LP49 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC187A0A096LP49 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC187A0A096LP49 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.53■■□□□ 1.36
CCDC187A0A096LP49 AL359504.2-201ENST00000605506 1601 ntBASIC23.52■■□□□ 1.36
CCDC187A0A096LP49 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC187A0A096LP49 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC187A0A096LP49 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC187A0A096LP49 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC187A0A096LP49 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC187A0A096LP49 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC187A0A096LP49 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC187A0A096LP49 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.5■■□□□ 1.35
CCDC187A0A096LP49 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC187A0A096LP49 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC187A0A096LP49 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.48■■□□□ 1.35
CCDC187A0A096LP49 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC187A0A096LP49 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.48■■□□□ 1.35
CCDC187A0A096LP49 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
CCDC187A0A096LP49 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC187A0A096LP49 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC187A0A096LP49 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC187A0A096LP49 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
CCDC187A0A096LP49 AL592295.1-201ENST00000400984 884 ntBASIC23.47■■□□□ 1.35
CCDC187A0A096LP49 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.47■■□□□ 1.35
CCDC187A0A096LP49 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.47■■□□□ 1.35
CCDC187A0A096LP49 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCDC187A0A096LP49 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CCDC187A0A096LP49 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC187A0A096LP49 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC187A0A096LP49 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC187A0A096LP49 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC187A0A096LP49 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.45■■□□□ 1.34
CCDC187A0A096LP49 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
CCDC187A0A096LP49 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
CCDC187A0A096LP49 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CCDC187A0A096LP49 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.45■■□□□ 1.34
CCDC187A0A096LP49 GUSBP5-201ENST00000418136 578 ntBASIC23.45■■□□□ 1.34
CCDC187A0A096LP49 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 AL031848.2-201ENST00000607670 837 ntBASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 AC131212.1-201ENST00000613771 668 ntBASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 WHAMMP3-201ENST00000611636 1609 ntBASIC23.44■■□□□ 1.34
CCDC187A0A096LP49 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC187A0A096LP49 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.43■■□□□ 1.34
CCDC187A0A096LP49 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.43■■□□□ 1.34
CCDC187A0A096LP49 AC103724.3-201ENST00000564481 992 ntBASIC23.43■■□□□ 1.34
CCDC187A0A096LP49 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.43■■□□□ 1.34
CCDC187A0A096LP49 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.43■■□□□ 1.34
CCDC187A0A096LP49 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.43■■□□□ 1.34
CCDC187A0A096LP49 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC187A0A096LP49 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.42■■□□□ 1.34
CCDC187A0A096LP49 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC187A0A096LP49 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC187A0A096LP49 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.42■■□□□ 1.34
CCDC187A0A096LP49 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC187A0A096LP49 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.41■■□□□ 1.34
CCDC187A0A096LP49 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC187A0A096LP49 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC187A0A096LP49 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CCDC187A0A096LP49 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CCDC187A0A096LP49 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.4■■□□□ 1.34
CCDC187A0A096LP49 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC187A0A096LP49 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC187A0A096LP49 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
CCDC187A0A096LP49 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.39■■□□□ 1.34
CCDC187A0A096LP49 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CCDC187A0A096LP49 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC187A0A096LP49 THA1P-201ENST00000590384 1145 ntBASIC23.39■■□□□ 1.33
CCDC187A0A096LP49 AC019171.1-201ENST00000601251 1056 ntBASIC23.39■■□□□ 1.33
CCDC187A0A096LP49 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC187A0A096LP49 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC187A0A096LP49 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC187A0A096LP49 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.38■■□□□ 1.33
CCDC187A0A096LP49 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC187A0A096LP49 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC187A0A096LP49 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC187A0A096LP49 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC187A0A096LP49 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CCDC187A0A096LP49 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC187A0A096LP49 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC187A0A096LP49 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC187A0A096LP49 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CCDC187A0A096LP49 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC187A0A096LP49 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC187A0A096LP49 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms