Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV9-1A0A075B6T8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV9-1A0A075B6T8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV9-1A0A075B6T8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV9-1A0A075B6T8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV9-1A0A075B6T8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV9-1A0A075B6T8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV9-1A0A075B6T8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRAV9-1A0A075B6T8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRAV9-1A0A075B6T8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV9-1A0A075B6T8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRAV9-1A0A075B6T8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV9-1A0A075B6T8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.47■□□□□ 0.55
TRAV9-1A0A075B6T8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV9-1A0A075B6T8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV9-1A0A075B6T8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV9-1A0A075B6T8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV9-1A0A075B6T8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV9-1A0A075B6T8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV9-1A0A075B6T8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV9-1A0A075B6T8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV9-1A0A075B6T8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV9-1A0A075B6T8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV9-1A0A075B6T8 AC022211.4-201ENST00000625094 2161 ntBASIC18.46■□□□□ 0.55
TRAV9-1A0A075B6T8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV9-1A0A075B6T8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV9-1A0A075B6T8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRAV9-1A0A075B6T8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV9-1A0A075B6T8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRAV9-1A0A075B6T8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRAV9-1A0A075B6T8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV9-1A0A075B6T8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV9-1A0A075B6T8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV9-1A0A075B6T8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV9-1A0A075B6T8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV9-1A0A075B6T8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRAV9-1A0A075B6T8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV9-1A0A075B6T8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAV9-1A0A075B6T8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV9-1A0A075B6T8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV9-1A0A075B6T8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAV9-1A0A075B6T8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV9-1A0A075B6T8 AC010501.1-201ENST00000606270 1962 ntBASIC18.42■□□□□ 0.54
TRAV9-1A0A075B6T8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV9-1A0A075B6T8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV9-1A0A075B6T8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV9-1A0A075B6T8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV9-1A0A075B6T8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV9-1A0A075B6T8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV9-1A0A075B6T8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV9-1A0A075B6T8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV9-1A0A075B6T8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV9-1A0A075B6T8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV9-1A0A075B6T8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV9-1A0A075B6T8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV9-1A0A075B6T8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV9-1A0A075B6T8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV9-1A0A075B6T8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
TRAV9-1A0A075B6T8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV9-1A0A075B6T8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV9-1A0A075B6T8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV9-1A0A075B6T8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV9-1A0A075B6T8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV9-1A0A075B6T8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAV9-1A0A075B6T8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV9-1A0A075B6T8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRAV9-1A0A075B6T8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV9-1A0A075B6T8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAV9-1A0A075B6T8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV9-1A0A075B6T8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TRAV9-1A0A075B6T8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV9-1A0A075B6T8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV9-1A0A075B6T8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.38■□□□□ 0.53
TRAV9-1A0A075B6T8 AC097639.1-201ENST00000565519 1891 ntBASIC18.37■□□□□ 0.53
TRAV9-1A0A075B6T8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV9-1A0A075B6T8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV9-1A0A075B6T8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV9-1A0A075B6T8 AC142472.1-201ENST00000612013 1741 ntBASIC18.37■□□□□ 0.53
TRAV9-1A0A075B6T8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV9-1A0A075B6T8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV9-1A0A075B6T8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV9-1A0A075B6T8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV9-1A0A075B6T8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV9-1A0A075B6T8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV9-1A0A075B6T8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRAV9-1A0A075B6T8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV9-1A0A075B6T8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-1A0A075B6T8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-1A0A075B6T8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-1A0A075B6T8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-1A0A075B6T8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-1A0A075B6T8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV9-1A0A075B6T8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV9-1A0A075B6T8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV9-1A0A075B6T8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV9-1A0A075B6T8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV9-1A0A075B6T8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV9-1A0A075B6T8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV9-1A0A075B6T8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV9-1A0A075B6T8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms