Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HS3ST4Q9Y661 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.32■□□□□ 0.52
HS3ST4Q9Y661 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HS3ST4Q9Y661 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HS3ST4Q9Y661 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HS3ST4Q9Y661 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HS3ST4Q9Y661 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.32■□□□□ 0.52
HS3ST4Q9Y661 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HS3ST4Q9Y661 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HS3ST4Q9Y661 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 IFNL4P1-201ENST00000607083 540 ntBASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 BX276092.7-203ENST00000637198 1536 ntBASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HS3ST4Q9Y661 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 AC122714.2-201ENST00000502787 707 ntBASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HS3ST4Q9Y661 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 NOC2LP2-201ENST00000407594 1944 ntBASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms