Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD54BQ9Y620 AC006116.8-202ENST00000587620 1550 ntBASIC18.51■□□□□ 0.55
RAD54BQ9Y620 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 KRT16P4-201ENST00000453883 522 ntBASIC18.5■□□□□ 0.55
RAD54BQ9Y620 VENTXP7-201ENST00000475503 772 ntBASIC18.5■□□□□ 0.55
RAD54BQ9Y620 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 AL160237.2-201ENST00000556165 472 ntBASIC18.5■□□□□ 0.55
RAD54BQ9Y620 AL353801.3-201ENST00000609898 542 ntBASIC18.5■□□□□ 0.55
RAD54BQ9Y620 AC009154.2-201ENST00000621177 724 ntBASIC18.5■□□□□ 0.55
RAD54BQ9Y620 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RAD54BQ9Y620 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 AKR1C7P-201ENST00000305623 895 ntBASIC18.49■□□□□ 0.55
RAD54BQ9Y620 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 MINOS1P3-201ENST00000457048 203 ntBASIC18.49■□□□□ 0.55
RAD54BQ9Y620 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 AC011840.4-201ENST00000578471 627 ntBASIC18.49■□□□□ 0.55
RAD54BQ9Y620 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 AC116407.2-201ENST00000613639 860 ntBASIC18.49■□□□□ 0.55
RAD54BQ9Y620 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.49■□□□□ 0.55
RAD54BQ9Y620 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAD54BQ9Y620 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms