Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SP110Q9HB58 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.27■□□□□ 0.51
SP110Q9HB58 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SP110Q9HB58 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SP110Q9HB58 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SP110Q9HB58 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SP110Q9HB58 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SP110Q9HB58 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SP110Q9HB58 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SP110Q9HB58 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SP110Q9HB58 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SP110Q9HB58 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 AC008764.6-201ENST00000595909 2069 ntBASIC18.26■□□□□ 0.51
SP110Q9HB58 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 ATP5G2P1-201ENST00000433580 426 ntBASIC18.26■□□□□ 0.51
SP110Q9HB58 DRAXINP1-201ENST00000437611 948 ntBASIC18.26■□□□□ 0.51
SP110Q9HB58 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.26■□□□□ 0.51
SP110Q9HB58 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.26■□□□□ 0.51
SP110Q9HB58 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 TPSP2-201ENST00000561760 610 ntBASIC18.26■□□□□ 0.51
SP110Q9HB58 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 AC092119.3-201ENST00000612618 583 ntBASIC18.26■□□□□ 0.51
SP110Q9HB58 NPAP1P7-201ENST00000613027 823 ntBASIC18.26■□□□□ 0.51
SP110Q9HB58 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SP110Q9HB58 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
SP110Q9HB58 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP110Q9HB58 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SP110Q9HB58 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.25■□□□□ 0.51
SP110Q9HB58 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.25■□□□□ 0.51
SP110Q9HB58 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.25■□□□□ 0.51
SP110Q9HB58 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.25■□□□□ 0.51
SP110Q9HB58 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.25■□□□□ 0.51
SP110Q9HB58 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.25■□□□□ 0.51
SP110Q9HB58 TOB2P1-201ENST00000469761 992 ntBASIC18.25■□□□□ 0.51
SP110Q9HB58 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.25■□□□□ 0.51
SP110Q9HB58 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
SP110Q9HB58 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.25■□□□□ 0.51
SP110Q9HB58 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.25■□□□□ 0.51
SP110Q9HB58 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP110Q9HB58 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.25■□□□□ 0.51
SP110Q9HB58 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.24■□□□□ 0.51
SP110Q9HB58 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.24■□□□□ 0.51
SP110Q9HB58 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.24■□□□□ 0.51
SP110Q9HB58 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SP110Q9HB58 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SP110Q9HB58 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SP110Q9HB58 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP110Q9HB58 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms