Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 KRT16P5-201ENST00000455284 522 ntBASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 PCDHA1-201ENST00000378133 2726 ntBASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.78■□□□□ 0.6
RHOXF2Q9BQY4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 IKBKGP1-201ENST00000612193 1073 ntBASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RHOXF2Q9BQY4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RHOXF2Q9BQY4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RHOXF2Q9BQY4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RHOXF2Q9BQY4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RHOXF2Q9BQY4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RHOXF2Q9BQY4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 NIFKP9-201ENST00000419265 221 ntBASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 RPS2P4-201ENST00000476944 856 ntBASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHOXF2Q9BQY4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms