Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT9Q92600 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT9Q92600 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT9Q92600 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.45■□□□□ 0.22
CNOT9Q92600 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT9Q92600 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT9Q92600 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT9Q92600 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT9Q92600 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT9Q92600 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.45■□□□□ 0.22
CNOT9Q92600 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.45■□□□□ 0.22
CNOT9Q92600 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.45■□□□□ 0.22
CNOT9Q92600 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT9Q92600 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CNOT9Q92600 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.45■□□□□ 0.22
CNOT9Q92600 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.45■□□□□ 0.22
CNOT9Q92600 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CNOT9Q92600 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.44■□□□□ 0.22
CNOT9Q92600 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CNOT9Q92600 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
CNOT9Q92600 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CNOT9Q92600 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 TSPY12P-201ENST00000421279 868 ntBASIC16.44■□□□□ 0.22
CNOT9Q92600 TMPOP1-202ENST00000424642 1267 ntBASIC16.44■□□□□ 0.22
CNOT9Q92600 SPDYE13P-201ENST00000445314 798 ntBASIC16.44■□□□□ 0.22
CNOT9Q92600 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.44■□□□□ 0.22
CNOT9Q92600 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.44■□□□□ 0.22
CNOT9Q92600 AC022616.7-201ENST00000525383 220 ntBASIC16.44■□□□□ 0.22
CNOT9Q92600 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.44■□□□□ 0.22
CNOT9Q92600 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.44■□□□□ 0.22
CNOT9Q92600 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.44■□□□□ 0.22
CNOT9Q92600 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.44■□□□□ 0.22
CNOT9Q92600 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT9Q92600 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.43■□□□□ 0.22
CNOT9Q92600 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.43■□□□□ 0.22
CNOT9Q92600 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CNOT9Q92600 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.43■□□□□ 0.22
CNOT9Q92600 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CNOT9Q92600 AL353692.3-201ENST00000407031 1396 ntBASIC16.43■□□□□ 0.22
CNOT9Q92600 KRT8P47-201ENST00000604727 1398 ntBASIC16.43■□□□□ 0.22
CNOT9Q92600 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.43■□□□□ 0.22
CNOT9Q92600 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.43■□□□□ 0.22
CNOT9Q92600 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.43■□□□□ 0.22
CNOT9Q92600 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.43■□□□□ 0.22
CNOT9Q92600 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.43■□□□□ 0.22
CNOT9Q92600 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.43■□□□□ 0.22
CNOT9Q92600 AC083849.1-201ENST00000615227 514 ntBASIC16.43■□□□□ 0.22
CNOT9Q92600 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.43■□□□□ 0.22
CNOT9Q92600 AC009154.2-201ENST00000621177 724 ntBASIC16.43■□□□□ 0.22
CNOT9Q92600 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.43■□□□□ 0.22
CNOT9Q92600 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.43■□□□□ 0.22
CNOT9Q92600 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.43■□□□□ 0.22
CNOT9Q92600 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CNOT9Q92600 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.43■□□□□ 0.22
CNOT9Q92600 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT9Q92600 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 AC009949.1-201ENST00000623048 1830 ntBASIC16.42■□□□□ 0.22
CNOT9Q92600 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.42■□□□□ 0.22
CNOT9Q92600 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.42■□□□□ 0.22
CNOT9Q92600 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CNOT9Q92600 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CNOT9Q92600 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT9Q92600 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.42■□□□□ 0.22
CNOT9Q92600 AC099398.1-201ENST00000567919 2776 ntBASIC16.42■□□□□ 0.22
CNOT9Q92600 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms