Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.9□□□□□ -0.024e-7■■□□□ 14
MATR3P43243 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.85□□□□□ -0.034e-7■■□□□ 14
MATR3P43243 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.62□□□□□ -0.074e-7■■□□□ 14
MATR3P43243 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.094e-7■■□□□ 14
MATR3P43243 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.234e-7■■□□□ 14
MATR3P43243 STAG3L4-202ENST00000416602 2143 ntTSL 2 BASIC12.76□□□□□ -0.374e-7■■□□□ 14
MATR3P43243 EHMT1-215ENST00000492232 710 ntTSL 312.45□□□□□ -0.426e-9■■□□□ 14
MATR3P43243 SLC1A5-204ENST00000593713 774 ntTSL 312.2□□□□□ -0.464e-7■■□□□ 14
MATR3P43243 PDP2-202ENST00000561475 1014 ntTSL 37.28□□□□□ -1.244e-7■■□□□ 14
MATR3P43243 SLC13A3-211ENST00000495082 1887 ntTSL 1 (best) BASIC12.53□□□□□ -0.42e-7■■□□□ 14
MATR3P43243 PIK3CB-207ENST00000473435 904 ntTSL 54.23□□□□□ -1.732e-6■■□□□ 14
MATR3P43243 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC14.41□□□□□ -0.14e-7■■□□□ 14
MATR3P43243 ZNF33A-207ENST00000478556 539 ntTSL 312.83□□□□□ -0.364e-7■■□□□ 14
MATR3P43243 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.964e-7■■□□□ 14
MATR3P43243 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.014e-7■■□□□ 14
MATR3P43243 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.324e-7■■□□□ 14
MATR3P43243 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.29□□□□□ -1.44e-7■■□□□ 14
MATR3P43243 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.91□□□□□ -1.464e-7■■□□□ 14
MATR3P43243 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.851e-6■■□□□ 14
MATR3P43243 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.711e-6■■□□□ 14
MATR3P43243 MAP4K4-209ENST00000421882 3416 ntTSL 59.52□□□□□ -0.892e-6■■□□□ 13.9
MATR3P43243 ZNF91-212ENST00000599743 662 ntTSL 3 BASIC11.58□□□□□ -0.564e-6■■□□□ 13.9
MATR3P43243 ZNF91-209ENST00000596989 565 ntTSL 311.58□□□□□ -0.564e-6■■□□□ 13.9
MATR3P43243 ZNF91-204ENST00000593341 730 ntTSL 1 (best)11.49□□□□□ -0.574e-6■■□□□ 13.9
MATR3P43243 ZNF91-211ENST00000599281 747 ntTSL 39.45□□□□□ -0.94e-6■■□□□ 13.9
MATR3P43243 ZNF91-208ENST00000596528 2405 ntTSL 28.95□□□□□ -0.984e-6■■□□□ 13.9
MATR3P43243 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.07■■□□□ 1.69e-10■■□□□ 13.9
MATR3P43243 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.529e-7■■□□□ 13.9
MATR3P43243 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.34■■□□□ 1.499e-7■■□□□ 13.9
MATR3P43243 SPIN1-202ENST00000462844 599 ntTSL 223.06■■□□□ 1.289e-7■■□□□ 13.9
MATR3P43243 PTMS-205ENST00000540828 644 ntTSL 1 (best)23.05■■□□□ 1.289e-7■■□□□ 13.9
MATR3P43243 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.94■■□□□ 1.269e-10■■□□□ 13.9
MATR3P43243 NIPSNAP2-210ENST00000487370 494 ntTSL 322.62■■□□□ 1.219e-7■■□□□ 13.9
MATR3P43243 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.159e-7■■□□□ 13.9
MATR3P43243 SPIN1-203ENST00000469017 2082 ntTSL 222.11■■□□□ 1.139e-7■■□□□ 13.9
MATR3P43243 CCT7-204ENST00000409924 567 ntTSL 322.05■■□□□ 1.129e-7■■□□□ 13.9
MATR3P43243 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.04■■□□□ 1.129e-7■■□□□ 13.9
MATR3P43243 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.02■■□□□ 1.119e-10■■□□□ 13.9
MATR3P43243 NIPSNAP2-203ENST00000437587 818 ntTSL 521.56■■□□□ 1.049e-7■■□□□ 13.9
MATR3P43243 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.26■□□□□ 0.999e-7■■□□□ 13.9
MATR3P43243 HDAC5-205ENST00000587135 504 ntTSL 221.25■□□□□ 0.999e-7■■□□□ 13.9
MATR3P43243 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.96■□□□□ 0.959e-7■■□□□ 13.9
MATR3P43243 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.929e-7■■□□□ 13.9
MATR3P43243 SPIN1-206ENST00000485804 814 ntTSL 320.66■□□□□ 0.99e-7■■□□□ 13.9
MATR3P43243 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.869e-7■■□□□ 13.9
MATR3P43243 PTMS-206ENST00000540874 501 ntTSL 220.37■□□□□ 0.859e-7■■□□□ 13.9
MATR3P43243 HDAC5-209ENST00000588703 445 ntTSL 319.68■□□□□ 0.749e-7■■□□□ 13.9
MATR3P43243 AHDC1-203ENST00000480033 546 ntTSL 519.63■□□□□ 0.739e-7■■□□□ 13.9
MATR3P43243 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.62■□□□□ 0.739e-7■■□□□ 13.9
MATR3P43243 SPIN1-205ENST00000485565 706 ntTSL 319.61■□□□□ 0.739e-7■■□□□ 13.9
MATR3P43243 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.669e-7■■□□□ 13.9
MATR3P43243 VPS53-215ENST00000573028 3204 ntTSL 219.13■□□□□ 0.659e-10■■□□□ 13.9
MATR3P43243 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.589e-7■■□□□ 13.9
MATR3P43243 AHDC1-205ENST00000490295 511 ntTSL 518.02■□□□□ 0.489e-7■■□□□ 13.9
MATR3P43243 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.98■□□□□ 0.479e-7■■□□□ 13.9
MATR3P43243 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.9■□□□□ 0.469e-7■■□□□ 13.9
MATR3P43243 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.459e-7■■□□□ 13.9
MATR3P43243 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.37■□□□□ 0.379e-7■■□□□ 13.9
MATR3P43243 VPS53-218ENST00000575207 575 ntTSL 417.2■□□□□ 0.349e-10■■□□□ 13.9
MATR3P43243 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.12■□□□□ 0.336e-8■■□□□ 13.9
MATR3P43243 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.327e-9■■□□□ 13.9
MATR3P43243 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.267e-9■■□□□ 13.9
MATR3P43243 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.6■□□□□ 0.259e-7■■□□□ 13.9
MATR3P43243 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.15■□□□□ 0.189e-7■■□□□ 13.9
MATR3P43243 NEDD4L-220ENST00000587881 1984 ntTSL 515.82■□□□□ 0.121e-7■■□□□ 13.9
MATR3P43243 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.19e-7■■□□□ 13.9
MATR3P43243 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.089e-7■■□□□ 13.9
MATR3P43243 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC15.1■□□□□ 0.019e-7■■□□□ 13.9
MATR3P43243 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC15.07■□□□□ 09e-7■■□□□ 13.9
MATR3P43243 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.029e-7■■□□□ 13.9
MATR3P43243 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC14.86□□□□□ -0.039e-7■■□□□ 13.9
MATR3P43243 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC14.76□□□□□ -0.059e-7■■□□□ 13.9
MATR3P43243 PTMS-204ENST00000540667 820 ntTSL 214.62□□□□□ -0.079e-7■■□□□ 13.9
MATR3P43243 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC14.61□□□□□ -0.079e-7■■□□□ 13.9
MATR3P43243 CBL-205ENST00000637974 3030 ntAPPRIS ALT2 TSL 514.51□□□□□ -0.099e-7■■□□□ 13.9
MATR3P43243 NIPSNAP2-204ENST00000446692 662 ntTSL 414.49□□□□□ -0.099e-7■■□□□ 13.9
MATR3P43243 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC14.36□□□□□ -0.119e-7■■□□□ 13.9
MATR3P43243 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC14.2□□□□□ -0.149e-7■■□□□ 13.9
MATR3P43243 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.149e-7■■□□□ 13.9
MATR3P43243 FN1-206ENST00000359671 8524 ntTSL 5 BASIC14.08□□□□□ -0.169e-7■■□□□ 13.9
MATR3P43243 LDLRAD4-219ENST00000593236 572 ntTSL 414.02□□□□□ -0.179e-10■■□□□ 13.9
MATR3P43243 SAMD4A-210ENST00000556069 795 ntTSL 214□□□□□ -0.176e-8■■□□□ 13.9
MATR3P43243 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC13.84□□□□□ -0.199e-7■■□□□ 13.9
MATR3P43243 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.219e-7■■□□□ 13.9
MATR3P43243 SPIN1-201ENST00000375859 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.219e-7■■□□□ 13.9
MATR3P43243 RAB2A-202ENST00000396696 614 ntTSL 213.45□□□□□ -0.269e-7■■□□□ 13.9
MATR3P43243 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC13.33□□□□□ -0.289e-7■■□□□ 13.9
MATR3P43243 ASB3-211ENST00000482829 1910 ntTSL 513.32□□□□□ -0.289e-7■■□□□ 13.9
MATR3P43243 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC13.3□□□□□ -0.289e-7■■□□□ 13.9
MATR3P43243 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC13.09□□□□□ -0.319e-7■■□□□ 13.9
MATR3P43243 CBL-203ENST00000634586 3457 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.329e-7■■□□□ 13.9
MATR3P43243 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC13.06□□□□□ -0.329e-7■■□□□ 13.9
MATR3P43243 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.339e-7■■□□□ 13.9
MATR3P43243 DLEU1-226ENST00000484606 400 ntTSL 512.77□□□□□ -0.379e-7■■□□□ 13.9
MATR3P43243 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.379e-7■■□□□ 13.9
MATR3P43243 AC025569.1-206ENST00000551438 596 ntTSL 412.56□□□□□ -0.49e-7■■□□□ 13.9
MATR3P43243 WDR37-204ENST00000436154 714 ntTSL 312.47□□□□□ -0.419e-7■■□□□ 13.9
MATR3P43243 WDR37-202ENST00000358220 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.429e-7■■□□□ 13.9
MATR3P43243 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC11.96□□□□□ -0.59e-7■■□□□ 13.9
MATR3P43243 CHD2-217ENST00000629136 480 ntTSL 511.76□□□□□ -0.539e-10■■□□□ 13.9
Retrieved 100 of 16,209 protein–RNA pairs in 68.8 ms