Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
HOXC12P31275 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HOXC12P31275 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HOXC12P31275 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC12P31275 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HOXC12P31275 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC12P31275 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC12P31275 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC12P31275 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC12P31275 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.81■□□□□ 0.12
HOXC12P31275 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC12P31275 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.81■□□□□ 0.12
HOXC12P31275 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.81■□□□□ 0.12
HOXC12P31275 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC12P31275 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HOXC12P31275 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.81■□□□□ 0.12
HOXC12P31275 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC12P31275 AL353801.3-201ENST00000609898 542 ntBASIC15.81■□□□□ 0.12
HOXC12P31275 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 AC120114.3-201ENST00000611923 658 ntBASIC15.81■□□□□ 0.12
HOXC12P31275 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.81■□□□□ 0.12
HOXC12P31275 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.81■□□□□ 0.12
HOXC12P31275 AL356309.3-201ENST00000624132 1934 ntBASIC15.81■□□□□ 0.12
HOXC12P31275 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC12P31275 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC12P31275 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXC12P31275 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXC12P31275 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 FER1L4-210ENST00000615531 5998 ntBASIC15.8■□□□□ 0.12
HOXC12P31275 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
HOXC12P31275 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXC12P31275 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXC12P31275 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXC12P31275 PMS2P1-201ENST00000431037 1228 ntBASIC15.8■□□□□ 0.12
HOXC12P31275 KRT18P65-201ENST00000439811 1286 ntBASIC15.8■□□□□ 0.12
HOXC12P31275 KRT16P4-201ENST00000453883 522 ntBASIC15.8■□□□□ 0.12
HOXC12P31275 AC104819.1-201ENST00000504587 486 ntBASIC15.8■□□□□ 0.12
HOXC12P31275 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HOXC12P31275 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXC12P31275 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HOXC12P31275 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HOXC12P31275 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HOXC12P31275 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXC12P31275 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC12P31275 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.8■□□□□ 0.12
HOXC12P31275 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC12P31275 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC12P31275 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
HOXC12P31275 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.79■□□□□ 0.12
HOXC12P31275 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC12P31275 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC12P31275 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC12P31275 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC12P31275 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.79■□□□□ 0.12
HOXC12P31275 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.79■□□□□ 0.12
HOXC12P31275 AC022898.2-201ENST00000616822 1312 ntBASIC15.79■□□□□ 0.12
HOXC12P31275 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HOXC12P31275 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC12P31275 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC12P31275 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC12P31275 AL590627.1-203ENST00000421194 1026 ntBASIC15.79■□□□□ 0.12
HOXC12P31275 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.79■□□□□ 0.12
HOXC12P31275 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC12P31275 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXC12P31275 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms