Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC092910.1-201ENST00000482027 1129 ntBASIC19.2■□□□□ 0.66
HOXA11P31270 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXA11P31270 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXA11P31270 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXA11P31270 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXA11P31270 AC105339.3-201ENST00000560043 636 ntBASIC19.2■□□□□ 0.66
HOXA11P31270 AC145285.3-201ENST00000564603 959 ntBASIC19.2■□□□□ 0.66
HOXA11P31270 AC109462.3-201ENST00000573934 613 ntBASIC19.2■□□□□ 0.66
HOXA11P31270 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXA11P31270 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXA11P31270 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXA11P31270 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HOXA11P31270 AP002414.3-201ENST00000589352 1468 ntBASIC19.2■□□□□ 0.66
HOXA11P31270 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA11P31270 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA11P31270 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA11P31270 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA11P31270 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA11P31270 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXA11P31270 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA11P31270 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXA11P31270 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA11P31270 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXA11P31270 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXA11P31270 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HOXA11P31270 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA11P31270 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA11P31270 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXA11P31270 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA11P31270 KRT18P27-201ENST00000427733 1299 ntBASIC19.19■□□□□ 0.66
HOXA11P31270 PMS2P1-201ENST00000431037 1228 ntBASIC19.19■□□□□ 0.66
HOXA11P31270 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA11P31270 AC098831.1-202ENST00000438821 336 ntBASIC19.19■□□□□ 0.66
HOXA11P31270 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXA11P31270 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.19■□□□□ 0.66
HOXA11P31270 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HOXA11P31270 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA11P31270 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXA11P31270 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXA11P31270 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA11P31270 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA11P31270 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HOXA11P31270 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HOXA11P31270 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HOXA11P31270 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA11P31270 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA11P31270 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA11P31270 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA11P31270 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA11P31270 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA11P31270 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA11P31270 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXA11P31270 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HOXA11P31270 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.18■□□□□ 0.66
HOXA11P31270 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXA11P31270 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXA11P31270 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXA11P31270 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXA11P31270 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXA11P31270 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXA11P31270 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.18■□□□□ 0.66
HOXA11P31270 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXA11P31270 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXA11P31270 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXA11P31270 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXA11P31270 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
HOXA11P31270 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA11P31270 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXA11P31270 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.17■□□□□ 0.66
HOXA11P31270 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXA11P31270 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXA11P31270 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXA11P31270 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA11P31270 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXA11P31270 AC073621.1-201ENST00000392730 636 ntBASIC19.17■□□□□ 0.66
HOXA11P31270 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HOXA11P31270 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXA11P31270 STK25P1-201ENST00000585406 838 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms