Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.48■□□□□ 0.71
VTNP04004 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.48■□□□□ 0.71
VTNP04004 AC073592.5-201ENST00000624854 528 ntBASIC19.48■□□□□ 0.71
VTNP04004 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
VTNP04004 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VTNP04004 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VTNP04004 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.47■□□□□ 0.71
VTNP04004 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.47■□□□□ 0.71
VTNP04004 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.47■□□□□ 0.71
VTNP04004 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.47■□□□□ 0.71
VTNP04004 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.47■□□□□ 0.71
VTNP04004 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
VTNP04004 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.47■□□□□ 0.71
VTNP04004 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.47■□□□□ 0.71
VTNP04004 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.47■□□□□ 0.71
VTNP04004 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.47■□□□□ 0.71
VTNP04004 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.47■□□□□ 0.71
VTNP04004 AC107918.4-202ENST00000641623 219 ntBASIC19.47■□□□□ 0.71
VTNP04004 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VTNP04004 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VTNP04004 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VTNP04004 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VTNP04004 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VTNP04004 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VTNP04004 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VTNP04004 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VTNP04004 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
VTNP04004 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.47■□□□□ 0.71
VTNP04004 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VTNP04004 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
VTNP04004 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.46■□□□□ 0.71
VTNP04004 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.46■□□□□ 0.71
VTNP04004 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VTNP04004 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VTNP04004 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VTNP04004 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VTNP04004 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.46■□□□□ 0.71
VTNP04004 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.46■□□□□ 0.71
VTNP04004 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VTNP04004 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.46■□□□□ 0.71
VTNP04004 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
VTNP04004 AL049757.1-201ENST00000616842 1596 ntBASIC19.46■□□□□ 0.71
VTNP04004 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VTNP04004 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
VTNP04004 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VTNP04004 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VTNP04004 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VTNP04004 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VTNP04004 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.46■□□□□ 0.71
VTNP04004 AC098831.1-202ENST00000438821 336 ntBASIC19.46■□□□□ 0.71
VTNP04004 IGHV3-22-201ENST00000520721 359 ntBASIC19.46■□□□□ 0.71
VTNP04004 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.46■□□□□ 0.71
VTNP04004 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
VTNP04004 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.46■□□□□ 0.71
VTNP04004 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.46■□□□□ 0.71
VTNP04004 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.46■□□□□ 0.71
VTNP04004 AC008735.5-201ENST00000623544 497 ntBASIC19.46■□□□□ 0.71
VTNP04004 AC073592.4-201ENST00000623827 446 ntBASIC19.46■□□□□ 0.71
VTNP04004 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.46■□□□□ 0.71
VTNP04004 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.46■□□□□ 0.71
VTNP04004 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VTNP04004 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
VTNP04004 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.46■□□□□ 0.71
VTNP04004 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
VTNP04004 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VTNP04004 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VTNP04004 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.45■□□□□ 0.7
VTNP04004 MIR940-201ENST00000401276 94 ntBASIC19.45■□□□□ 0.7
VTNP04004 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 SPDYE21P-201ENST00000413323 827 ntBASIC19.45■□□□□ 0.7
VTNP04004 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.45■□□□□ 0.7
VTNP04004 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.45■□□□□ 0.7
VTNP04004 POLD2P1-201ENST00000511220 997 ntBASIC19.45■□□□□ 0.7
VTNP04004 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.45■□□□□ 0.7
VTNP04004 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.45■□□□□ 0.7
VTNP04004 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.45■□□□□ 0.7
VTNP04004 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
VTNP04004 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.45■□□□□ 0.7
VTNP04004 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTNP04004 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VTNP04004 AL022326.1-202ENST00000641533 845 ntBASIC19.45■□□□□ 0.7
VTNP04004 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.45■□□□□ 0.7
VTNP04004 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
VTNP04004 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms