Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 AC009336.1-201ENST00000608941 1553 ntBASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 AC004461.1-201ENST00000412461 403 ntBASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 AC105339.1-204ENST00000636249 355 ntBASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC27.22■■□□□ 1.95
PLEKHD1A6NEE1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 BCRP1-201ENST00000444246 691 ntBASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 HLA-J-203ENST00000494367 1087 ntBASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC27.21■■□□□ 1.95
PLEKHD1A6NEE1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PLEKHD1A6NEE1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC27.2■■□□□ 1.95
PLEKHD1A6NEE1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 AC004449.1-201ENST00000564240 433 ntBASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC27.2■■□□□ 1.94
PLEKHD1A6NEE1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 AC073592.3-201ENST00000625118 1834 ntBASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 TK1-204ENST00000590430 683 ntTSL 3 BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PLEKHD1A6NEE1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PLEKHD1A6NEE1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC27.18■■□□□ 1.94
PLEKHD1A6NEE1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PLEKHD1A6NEE1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC27.18■■□□□ 1.94
PLEKHD1A6NEE1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
PLEKHD1A6NEE1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PLEKHD1A6NEE1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PLEKHD1A6NEE1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
PLEKHD1A6NEE1 BX276092.7-203ENST00000637198 1536 ntBASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms