Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC004790.2-201ENST00000623588 572 ntBASIC19.42■□□□□ 0.7
HIPK3Q9H422 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIPK3Q9H422 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HIPK3Q9H422 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.42■□□□□ 0.7
HIPK3Q9H422 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIPK3Q9H422 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.42■□□□□ 0.7
HIPK3Q9H422 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK3Q9H422 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.41■□□□□ 0.7
HIPK3Q9H422 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HIPK3Q9H422 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK3Q9H422 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HIPK3Q9H422 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK3Q9H422 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK3Q9H422 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK3Q9H422 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK3Q9H422 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK3Q9H422 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.41■□□□□ 0.7
HIPK3Q9H422 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.41■□□□□ 0.7
HIPK3Q9H422 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HIPK3Q9H422 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.41■□□□□ 0.7
HIPK3Q9H422 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
HIPK3Q9H422 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
HIPK3Q9H422 SIRPAP1-201ENST00000448467 1770 ntBASIC19.41■□□□□ 0.7
HIPK3Q9H422 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK3Q9H422 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK3Q9H422 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HIPK3Q9H422 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK3Q9H422 ESPNP-201ENST00000270691 2015 ntBASIC19.41■□□□□ 0.7
HIPK3Q9H422 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK3Q9H422 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK3Q9H422 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.4■□□□□ 0.7
HIPK3Q9H422 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK3Q9H422 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK3Q9H422 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK3Q9H422 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK3Q9H422 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK3Q9H422 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK3Q9H422 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK3Q9H422 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK3Q9H422 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 AC005332.7-201ENST00000614046 2005 ntBASIC19.4■□□□□ 0.7
HIPK3Q9H422 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK3Q9H422 AL353593.2-201ENST00000602529 1483 ntBASIC19.4■□□□□ 0.7
HIPK3Q9H422 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.4■□□□□ 0.7
HIPK3Q9H422 AC148477.5-201ENST00000625164 1645 ntBASIC19.4■□□□□ 0.7
HIPK3Q9H422 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
HIPK3Q9H422 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HIPK3Q9H422 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HIPK3Q9H422 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HIPK3Q9H422 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HIPK3Q9H422 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK3Q9H422 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK3Q9H422 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK3Q9H422 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK3Q9H422 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK3Q9H422 MIR770-201ENST00000390219 98 ntBASIC19.39■□□□□ 0.69
HIPK3Q9H422 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK3Q9H422 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 AC132938.5-201ENST00000624980 1813 ntBASIC19.39■□□□□ 0.69
HIPK3Q9H422 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK3Q9H422 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK3Q9H422 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK3Q9H422 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.39■□□□□ 0.69
HIPK3Q9H422 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK3Q9H422 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HIPK3Q9H422 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HIPK3Q9H422 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIPK3Q9H422 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIPK3Q9H422 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIPK3Q9H422 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HIPK3Q9H422 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.38■□□□□ 0.69
HIPK3Q9H422 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.38■□□□□ 0.69
HIPK3Q9H422 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.38■□□□□ 0.69
HIPK3Q9H422 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HIPK3Q9H422 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms