Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.951e-7■■□□□ 13.9
CSTF2TQ9H0L4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.297e-8■■□□□ 13.9
CSTF2TQ9H0L4 FADS1-218ENST00000544696 567 ntTSL 317.97■□□□□ 0.477e-8■■□□□ 13.9
CSTF2TQ9H0L4 DEAF1-207ENST00000527170 1623 ntTSL 1 (best)14.5□□□□□ -0.097e-8■■□□□ 13.9
CSTF2TQ9H0L4 DEAF1-204ENST00000525904 797 ntTSL 312.05□□□□□ -0.487e-8■■□□□ 13.9
CSTF2TQ9H0L4 DEAF1-212ENST00000530813 668 ntTSL 512.05□□□□□ -0.487e-8■■□□□ 13.9
CSTF2TQ9H0L4 BCAR1-219ENST00000567215 581 ntTSL 412.91□□□□□ -0.342e-8■■□□□ 13.9
CSTF2TQ9H0L4 ACSL3-209ENST00000535678 560 ntTSL 318.82■□□□□ 0.62e-8■■□□□ 13.9
CSTF2TQ9H0L4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.052e-8■■□□□ 13.9
CSTF2TQ9H0L4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.062e-8■■□□□ 13.9
CSTF2TQ9H0L4 SLCO4A1-208ENST00000497209 3092 ntTSL 1 (best)14.56□□□□□ -0.085e-7■■□□□ 13.9
CSTF2TQ9H0L4 NDUFA11-204ENST00000591341 403 ntTSL 215.24■□□□□ 0.031e-9■■□□□ 13.9
CSTF2TQ9H0L4 TCF25-207ENST00000562256 1879 ntTSL 1 (best)17.15■□□□□ 0.347e-8■■□□□ 13.9
CSTF2TQ9H0L4 TCF25-224ENST00000570116 1947 ntTSL 515.6■□□□□ 0.097e-8■■□□□ 13.9
CSTF2TQ9H0L4 TCF25-210ENST00000563484 468 ntTSL 210.52□□□□□ -0.737e-8■■□□□ 13.9
CSTF2TQ9H0L4 PAM16-210ENST00000575636 732 ntTSL 316.56■□□□□ 0.242e-6■■□□□ 13.9
CSTF2TQ9H0L4 AC005307.1-201ENST00000567877 1570 ntTSL 3 BASIC8.65□□□□□ -1.032e-10■■□□□ 13.9
CSTF2TQ9H0L4 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.243e-7■■□□□ 13.9
CSTF2TQ9H0L4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.73■□□□□ 0.597e-8■■□□□ 13.9
CSTF2TQ9H0L4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.037e-8■■□□□ 13.9
CSTF2TQ9H0L4 RREB1-206ENST00000471433 1021 ntTSL 512.94□□□□□ -0.347e-8■■□□□ 13.9
CSTF2TQ9H0L4 RREB1-209ENST00000491191 998 ntTSL 512.94□□□□□ -0.347e-8■■□□□ 13.9
CSTF2TQ9H0L4 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.77□□□□□ -0.212e-6■■□□□ 13.9
CSTF2TQ9H0L4 AC068888.1-204ENST00000550601 711 ntTSL 313.06□□□□□ -0.322e-6■■□□□ 13.9
CSTF2TQ9H0L4 FAM60A-204ENST00000536836 1734 ntTSL 213.1□□□□□ -0.312e-10■■□□□ 13.9
CSTF2TQ9H0L4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.99□□□□□ -0.332e-10■■□□□ 13.9
CSTF2TQ9H0L4 FAM60A-206ENST00000539409 2532 ntTSL 1 (best) BASIC10.38□□□□□ -0.752e-10■■□□□ 13.9
CSTF2TQ9H0L4 FAM60A-201ENST00000337682 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.872e-10■■□□□ 13.9
CSTF2TQ9H0L4 FAM60A-205ENST00000539004 459 ntTSL 56.16□□□□□ -1.422e-10■■□□□ 13.9
CSTF2TQ9H0L4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.786e-15■■□□□ 13.9
CSTF2TQ9H0L4 SLC39A14-209ENST00000520644 377 ntTSL 518.76■□□□□ 0.596e-15■■□□□ 13.9
CSTF2TQ9H0L4 SLC39A14-212ENST00000524285 570 ntTSL 416.65■□□□□ 0.266e-15■■□□□ 13.9
CSTF2TQ9H0L4 DNM1-210ENST00000625457 333 ntTSL 218.56■□□□□ 0.568e-7■■□□□ 13.9
CSTF2TQ9H0L4 DNM1-214ENST00000630850 3442 ntTSL 212.74□□□□□ -0.378e-7■■□□□ 13.9
CSTF2TQ9H0L4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.032e-7■■□□□ 13.8
CSTF2TQ9H0L4 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.252e-8■■□□□ 13.8
CSTF2TQ9H0L4 AC018521.1-202ENST00000641877 2655 ntBASIC11.27□□□□□ -0.68e-12■■□□□ 13.8
CSTF2TQ9H0L4 AC018521.1-201ENST00000582262 575 ntTSL 49.08□□□□□ -0.968e-12■■□□□ 13.8
CSTF2TQ9H0L4 YWHAH-204ENST00000443669 822 ntTSL 321.6■■□□□ 1.051e-7■■□□□ 13.8
CSTF2TQ9H0L4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.011e-7■■□□□ 13.8
CSTF2TQ9H0L4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.1■□□□□ 0.971e-7■■□□□ 13.8
CSTF2TQ9H0L4 YWHAH-206ENST00000479649 662 ntTSL 310.59□□□□□ -0.711e-7■■□□□ 13.8
CSTF2TQ9H0L4 AKT2-227ENST00000498350 562 ntTSL 413.61□□□□□ -0.238e-7■■□□□ 13.8
CSTF2TQ9H0L4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.63■■■□□ 2.333e-18■■□□□ 13.8
CSTF2TQ9H0L4 SREBF1-206ENST00000423161 1058 ntTSL 317.5■□□□□ 0.396e-8■■□□□ 13.8
CSTF2TQ9H0L4 LPAR2-204ENST00000588233 558 ntTSL 320.42■□□□□ 0.866e-8■■□□□ 13.8
CSTF2TQ9H0L4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.416e-8■■□□□ 13.8
CSTF2TQ9H0L4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.04■□□□□ 0.162e-8■■□□□ 13.8
CSTF2TQ9H0L4 TRIM11-205ENST00000602308 586 ntTSL 313.83□□□□□ -0.22e-8■■□□□ 13.8
CSTF2TQ9H0L4 TRIM11-206ENST00000602582 682 ntTSL 313.47□□□□□ -0.252e-8■■□□□ 13.8
CSTF2TQ9H0L4 LRRFIP1-205ENST00000420665 570 ntTSL 322.43■■□□□ 1.182e-6■■□□□ 13.8
CSTF2TQ9H0L4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.56□□□□□ -0.242e-6■■□□□ 13.8
CSTF2TQ9H0L4 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.292e-6■■□□□ 13.8
CSTF2TQ9H0L4 LRRFIP1-209ENST00000473815 476 ntTSL 312.73□□□□□ -0.372e-6■■□□□ 13.8
CSTF2TQ9H0L4 CALM2-207ENST00000484408 682 ntTSL 519.03■□□□□ 0.643e-8■■□□□ 13.8
CSTF2TQ9H0L4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.433e-8■■□□□ 13.8
CSTF2TQ9H0L4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.04■□□□□ 0.323e-8■■□□□ 13.8
CSTF2TQ9H0L4 CALM2-208ENST00000489742 522 ntTSL 315.02■□□□□ -03e-8■■□□□ 13.8
CSTF2TQ9H0L4 CALM2-203ENST00000432899 1004 ntTSL 512.81□□□□□ -0.363e-8■■□□□ 13.8
CSTF2TQ9H0L4 CALM2-202ENST00000409563 770 ntTSL 5 BASIC9.37□□□□□ -0.913e-8■■□□□ 13.8
CSTF2TQ9H0L4 CALM2-204ENST00000456319 703 ntTSL 27.96□□□□□ -1.143e-8■■□□□ 13.8
CSTF2TQ9H0L4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.34■□□□□ 0.853e-7■■□□□ 13.8
CSTF2TQ9H0L4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.723e-7■■□□□ 13.8
CSTF2TQ9H0L4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.33e-7■■□□□ 13.8
CSTF2TQ9H0L4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.143e-9■■□□□ 13.8
CSTF2TQ9H0L4 GRB7-208ENST00000485182 879 ntTSL 215.64■□□□□ 0.093e-9■■□□□ 13.8
CSTF2TQ9H0L4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.013e-9■■□□□ 13.8
CSTF2TQ9H0L4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.77□□□□□ -0.053e-9■■□□□ 13.8
CSTF2TQ9H0L4 GRB7-209ENST00000577695 612 ntTSL 513.87□□□□□ -0.193e-9■■□□□ 13.8
CSTF2TQ9H0L4 GRB7-211ENST00000583813 560 ntTSL 413.74□□□□□ -0.213e-9■■□□□ 13.8
CSTF2TQ9H0L4 GRB7-213ENST00000584819 1146 ntTSL 213.53□□□□□ -0.243e-9■■□□□ 13.8
CSTF2TQ9H0L4 GRB7-210ENST00000578702 630 ntTSL 312.53□□□□□ -0.43e-9■■□□□ 13.8
CSTF2TQ9H0L4 CU639417.2-202ENST00000624077 471 ntTSL 222.88■■□□□ 1.251e-10■■□□□ 13.8
CSTF2TQ9H0L4 LRRC14-208ENST00000530854 730 ntTSL 319.16■□□□□ 0.662e-7■■□□□ 13.8
CSTF2TQ9H0L4 COA3-202ENST00000586680 1374 ntTSL 217.85■□□□□ 0.452e-7■■□□□ 13.8
CSTF2TQ9H0L4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.081e-10■■□□□ 13.8
CSTF2TQ9H0L4 TMEM101-206ENST00000590905 573 ntTSL 513.65□□□□□ -0.221e-10■■□□□ 13.8
CSTF2TQ9H0L4 TMEM101-202ENST00000585950 682 ntTSL 311.97□□□□□ -0.491e-10■■□□□ 13.8
CSTF2TQ9H0L4 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.541e-10■■□□□ 13.8
CSTF2TQ9H0L4 TMEM101-203ENST00000586174 593 ntTSL 49.87□□□□□ -0.831e-10■■□□□ 13.8
CSTF2TQ9H0L4 TMEM101-208ENST00000592127 576 ntTSL 49.79□□□□□ -0.841e-10■■□□□ 13.8
CSTF2TQ9H0L4 CSNK2A1-210ENST00000619801 655 ntTSL 38.15□□□□□ -1.12e-7■■□□□ 13.8
CSTF2TQ9H0L4 VAV2-204ENST00000472905 506 ntTSL 315.55■□□□□ 0.084e-7■■□□□ 13.8
CSTF2TQ9H0L4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.292e-7■■□□□ 13.8
CSTF2TQ9H0L4 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.722e-6■■□□□ 13.8
CSTF2TQ9H0L4 SRRM2-224ENST00000575870 696 ntTSL 39.53□□□□□ -0.889e-36■■□□□ 13.8
CSTF2TQ9H0L4 SHANK2-208ENST00000426687 460 ntTSL 58.39□□□□□ -1.072e-6■■□□□ 13.8
CSTF2TQ9H0L4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -02e-11■■□□□ 13.8
CSTF2TQ9H0L4 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.492e-11■■□□□ 13.8
CSTF2TQ9H0L4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.921e-9■■□□□ 13.8
CSTF2TQ9H0L4 EPHA2-202ENST00000461614 875 ntTSL 223.53■■□□□ 1.363e-6■■□□□ 13.8
CSTF2TQ9H0L4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.664e-8■■□□□ 13.8
CSTF2TQ9H0L4 FAM229A-202ENST00000416512 2759 ntTSL 1 (best)16.9■□□□□ 0.34e-8■■□□□ 13.8
CSTF2TQ9H0L4 FAM229A-201ENST00000415596 446 ntTSL 314.13□□□□□ -0.154e-8■■□□□ 13.8
CSTF2TQ9H0L4 IQGAP1-212ENST00000560418 559 ntTSL 514.32□□□□□ -0.121e-6■■□□□ 13.8
CSTF2TQ9H0L4 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC7.73□□□□□ -1.171e-6■■□□□ 13.8
CSTF2TQ9H0L4 IQGAP1-218ENST00000633485 5863 ntTSL 57.67□□□□□ -1.181e-6■■□□□ 13.8
CSTF2TQ9H0L4 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.251e-6■■□□□ 13.8
CSTF2TQ9H0L4 BCAR1-214ENST00000563700 576 ntTSL 413.49□□□□□ -0.252e-8■■□□□ 13.8
CSTF2TQ9H0L4 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.61e-6■■□□□ 13.8
Retrieved 100 of 19,151 protein–RNA pairs in 182.7 ms