RNA–Protein interactions for RNA: ENST00000619801.4

CSNK2A1-210, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 3

Gene CSNK2A1, Length 655 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-210ENST00000619801 AEBP2Q6ZN18 517 aaPredicted RBP26.51■■□□□ 1.83
CSNK2A1-210ENST00000619801 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
CSNK2A1-210ENST00000619801 PHF23Q9BUL5 403 aaPredicted RBP22.5■■□□□ 1.19
CSNK2A1-210ENST00000619801 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
CSNK2A1-210ENST00000619801 FOXD1Q16676 465 aa20.92■□□□□ 0.94
CSNK2A1-210ENST00000619801 NISCHQ9Y2I1 1504 aa20.7■□□□□ 0.9
CSNK2A1-210ENST00000619801 PLPPR3Q6T4P5 718 aa20.54■□□□□ 0.88
CSNK2A1-210ENST00000619801 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
CSNK2A1-210ENST00000619801 ADRA2BP18089 450 aa19.93■□□□□ 0.78
CSNK2A1-210ENST00000619801 PIAS4Q8N2W9 510 aaPredicted RBP19.63■□□□□ 0.73
CSNK2A1-210ENST00000619801 MSH5O43196 834 aa19.26■□□□□ 0.67
CSNK2A1-210ENST00000619801 ABCC9O60706 1549 aa18.59■□□□□ 0.57
CSNK2A1-210ENST00000619801 CCDC180Q9P1Z9 1646 aa18.26■□□□□ 0.51
CSNK2A1-210ENST00000619801 MAPK8IP2Q13387 824 aaPredicted RBP18.19■□□□□ 0.5
CSNK2A1-210ENST00000619801 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
CSNK2A1-210ENST00000619801 PPP4R3CPQ6ZMV5 832 aa18.13■□□□□ 0.49
CSNK2A1-210ENST00000619801 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
CSNK2A1-210ENST00000619801 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.48
CSNK2A1-210ENST00000619801 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
CSNK2A1-210ENST00000619801 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
CSNK2A1-210ENST00000619801 KCNA4P22459 653 aa17.45■□□□□ 0.38
CSNK2A1-210ENST00000619801 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
CSNK2A1-210ENST00000619801 DCAF8L2P0C7V8 631 aa17.39■□□□□ 0.37
CSNK2A1-210ENST00000619801 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.37
CSNK2A1-210ENST00000619801 HOXD11P31277 338 aaPredicted RBP17.36■□□□□ 0.37
CSNK2A1-210ENST00000619801 RNF216Q9NWF9 866 aaPredicted RBP17.34■□□□□ 0.37
CSNK2A1-210ENST00000619801 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
CSNK2A1-210ENST00000619801 ZCCHC6Q5VYS8 1495 aaKnown RBP17.25■□□□□ 0.35
CSNK2A1-210ENST00000619801 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
CSNK2A1-210ENST00000619801 NACADO15069 1562 aa17.17■□□□□ 0.34
CSNK2A1-210ENST00000619801 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
CSNK2A1-210ENST00000619801 MYO15BQ96JP2 1530 aa17.12■□□□□ 0.33
CSNK2A1-210ENST00000619801 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
CSNK2A1-210ENST00000619801 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
CSNK2A1-210ENST00000619801 BICRAQ9NZM4 1560 aa17.03■□□□□ 0.32
CSNK2A1-210ENST00000619801 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
CSNK2A1-210ENST00000619801 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
CSNK2A1-210ENST00000619801 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
CSNK2A1-210ENST00000619801 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
CSNK2A1-210ENST00000619801 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
CSNK2A1-210ENST00000619801 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
CSNK2A1-210ENST00000619801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.56■□□□□ 0.24
CSNK2A1-210ENST00000619801 RNF39Q9H2S5 420 aa16.55■□□□□ 0.24
CSNK2A1-210ENST00000619801 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
CSNK2A1-210ENST00000619801 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
CSNK2A1-210ENST00000619801 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.2
CSNK2A1-210ENST00000619801 U3KPZ7 1027 aaPredicted RBP16.31■□□□□ 0.2
CSNK2A1-210ENST00000619801 C1QBPQ07021 282 aaKnown RBP16.26■□□□□ 0.19
CSNK2A1-210ENST00000619801 CUX2O14529 1486 aa16.23■□□□□ 0.19
CSNK2A1-210ENST00000619801 ZBTB22O15209 634 aa16.09■□□□□ 0.17
CSNK2A1-210ENST00000619801 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
CSNK2A1-210ENST00000619801 FOXD4L1Q9NU39 408 aa16.04■□□□□ 0.16
CSNK2A1-210ENST00000619801 ERCC6Q03468 1493 aa16.02■□□□□ 0.15
CSNK2A1-210ENST00000619801 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
CSNK2A1-210ENST00000619801 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
CSNK2A1-210ENST00000619801 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
CSNK2A1-210ENST00000619801 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
CSNK2A1-210ENST00000619801 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
CSNK2A1-210ENST00000619801 SMARCA2P51531 1590 aa15.88■□□□□ 0.13
CSNK2A1-210ENST00000619801 ATAD2BQ9ULI0 1458 aa15.88■□□□□ 0.13
CSNK2A1-210ENST00000619801 RSF1Q96T23 1441 aaPredicted RBP15.87■□□□□ 0.13
CSNK2A1-210ENST00000619801 CAPN15O75808 1086 aa15.87■□□□□ 0.13
CSNK2A1-210ENST00000619801 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
CSNK2A1-210ENST00000619801 NESP48681 1621 aa15.85■□□□□ 0.13
CSNK2A1-210ENST00000619801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.12
CSNK2A1-210ENST00000619801 HNRNPUL2Q1KMD3 747 aaKnown RBP15.83■□□□□ 0.12
CSNK2A1-210ENST00000619801 PEG3Q9GZU2 1588 aa15.82■□□□□ 0.12
CSNK2A1-210ENST00000619801 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
CSNK2A1-210ENST00000619801 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
CSNK2A1-210ENST00000619801 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
CSNK2A1-210ENST00000619801 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
CSNK2A1-210ENST00000619801 WIZO95785 1651 aa15.78■□□□□ 0.12
CSNK2A1-210ENST00000619801 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
CSNK2A1-210ENST00000619801 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
CSNK2A1-210ENST00000619801 HMGXB3Q12766 1538 aa15.75■□□□□ 0.11
CSNK2A1-210ENST00000619801 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
CSNK2A1-210ENST00000619801 ATF5Q9Y2D1 282 aaPredicted RBP15.71■□□□□ 0.11
CSNK2A1-210ENST00000619801 APLP2Q06481 763 aa15.7■□□□□ 0.1
CSNK2A1-210ENST00000619801 DSG3P32926 999 aa15.68■□□□□ 0.1
CSNK2A1-210ENST00000619801 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
CSNK2A1-210ENST00000619801 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
CSNK2A1-210ENST00000619801 ABCB7O75027 752 aa15.61■□□□□ 0.09
CSNK2A1-210ENST00000619801 KIF21AQ7Z4S6 1674 aa15.58■□□□□ 0.08
CSNK2A1-210ENST00000619801 LAMC3Q9Y6N6 1575 aa15.57■□□□□ 0.08
CSNK2A1-210ENST00000619801 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
CSNK2A1-210ENST00000619801 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
CSNK2A1-210ENST00000619801 WDR62O43379 1518 aa15.43■□□□□ 0.06
CSNK2A1-210ENST00000619801 ATXN8OSP0DMR3 200 aa15.43■□□□□ 0.06
CSNK2A1-210ENST00000619801 CADPSQ9ULU8 1353 aa15.43■□□□□ 0.06
CSNK2A1-210ENST00000619801 POLA2Q14181 598 aa15.42■□□□□ 0.06
CSNK2A1-210ENST00000619801 MRC2Q9UBG0 1479 aa15.41■□□□□ 0.06
CSNK2A1-210ENST00000619801 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
CSNK2A1-210ENST00000619801 CFTRP13569 1480 aa15.35■□□□□ 0.05
CSNK2A1-210ENST00000619801 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
CSNK2A1-210ENST00000619801 RIMBP3BA6NNM3 1639 aa15.29■□□□□ 0.04
CSNK2A1-210ENST00000619801 RIMBP3Q9UFD9 1639 aa15.29■□□□□ 0.04
CSNK2A1-210ENST00000619801 FANCD2Q9BXW9 1451 aa15.23■□□□□ 0.03
CSNK2A1-210ENST00000619801 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
CSNK2A1-210ENST00000619801 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
CSNK2A1-210ENST00000619801 PRDM2Q13029 1718 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms