Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 AC103564.2-201ENST00000432853 1299 ntBASIC18.85■□□□□ 0.61
VARS2Q5ST30 BX005266.1-201ENST00000473402 457 ntBASIC18.85■□□□□ 0.61
VARS2Q5ST30 RPL13AP23-201ENST00000480739 586 ntBASIC18.85■□□□□ 0.61
VARS2Q5ST30 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 AC012640.2-201ENST00000561606 901 ntBASIC18.85■□□□□ 0.61
VARS2Q5ST30 AC106730.1-201ENST00000566722 1090 ntBASIC18.85■□□□□ 0.61
VARS2Q5ST30 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 AC004408.2-201ENST00000623613 2777 ntBASIC18.85■□□□□ 0.61
VARS2Q5ST30 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 HLA-J-201ENST00000462773 1622 ntBASIC18.85■□□□□ 0.61
VARS2Q5ST30 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.84■□□□□ 0.61
VARS2Q5ST30 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 SIRPAP1-201ENST00000448467 1770 ntBASIC18.84■□□□□ 0.61
VARS2Q5ST30 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.84■□□□□ 0.61
VARS2Q5ST30 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.84■□□□□ 0.61
VARS2Q5ST30 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.84■□□□□ 0.61
VARS2Q5ST30 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.84■□□□□ 0.61
VARS2Q5ST30 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.84■□□□□ 0.61
VARS2Q5ST30 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.84■□□□□ 0.61
VARS2Q5ST30 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.84■□□□□ 0.61
VARS2Q5ST30 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 REXO1L9P-201ENST00000604264 2108 ntBASIC18.84■□□□□ 0.61
VARS2Q5ST30 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
VARS2Q5ST30 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
VARS2Q5ST30 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARS2Q5ST30 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
VARS2Q5ST30 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.83■□□□□ 0.61
VARS2Q5ST30 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VARS2Q5ST30 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
VARS2Q5ST30 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
VARS2Q5ST30 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
VARS2Q5ST30 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
VARS2Q5ST30 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VARS2Q5ST30 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VARS2Q5ST30 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
VARS2Q5ST30 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.83■□□□□ 0.6
VARS2Q5ST30 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.83■□□□□ 0.6
VARS2Q5ST30 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.83■□□□□ 0.6
VARS2Q5ST30 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.83■□□□□ 0.6
VARS2Q5ST30 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.83■□□□□ 0.6
VARS2Q5ST30 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VARS2Q5ST30 AC073592.4-201ENST00000623827 446 ntBASIC18.83■□□□□ 0.6
VARS2Q5ST30 AC107918.4-202ENST00000641623 219 ntBASIC18.83■□□□□ 0.6
VARS2Q5ST30 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.83■□□□□ 0.6
VARS2Q5ST30 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VARS2Q5ST30 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VARS2Q5ST30 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.83■□□□□ 0.6
VARS2Q5ST30 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.83■□□□□ 0.6
VARS2Q5ST30 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARS2Q5ST30 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARS2Q5ST30 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARS2Q5ST30 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARS2Q5ST30 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VARS2Q5ST30 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARS2Q5ST30 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARS2Q5ST30 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARS2Q5ST30 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 AC092910.1-201ENST00000482027 1129 ntBASIC18.82■□□□□ 0.6
VARS2Q5ST30 IGHV3-22-201ENST00000520721 359 ntBASIC18.82■□□□□ 0.6
VARS2Q5ST30 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 AC008735.5-201ENST00000623544 497 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms