Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.96■□□□□ 0.47
AP1S1P61966 FOSL1P1-201ENST00000511041 816 ntBASIC17.96■□□□□ 0.47
AP1S1P61966 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.96■□□□□ 0.47
AP1S1P61966 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.96■□□□□ 0.47
AP1S1P61966 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.96■□□□□ 0.47
AP1S1P61966 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 BX276092.7-203ENST00000637198 1536 ntBASIC17.96■□□□□ 0.47
AP1S1P61966 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.96■□□□□ 0.47
AP1S1P61966 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.96■□□□□ 0.47
AP1S1P61966 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.96■□□□□ 0.47
AP1S1P61966 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
AP1S1P61966 AC010460.3-201ENST00000511359 1579 ntBASIC17.96■□□□□ 0.46
AP1S1P61966 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
AP1S1P61966 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
AP1S1P61966 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 COX5BP2-201ENST00000392354 334 ntBASIC17.95■□□□□ 0.46
AP1S1P61966 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
AP1S1P61966 KRT16P4-201ENST00000453883 522 ntBASIC17.95■□□□□ 0.46
AP1S1P61966 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.95■□□□□ 0.46
AP1S1P61966 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.95■□□□□ 0.46
AP1S1P61966 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.95■□□□□ 0.46
AP1S1P61966 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.95■□□□□ 0.46
AP1S1P61966 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
AP1S1P61966 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
AP1S1P61966 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.95■□□□□ 0.46
AP1S1P61966 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.95■□□□□ 0.46
AP1S1P61966 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.95■□□□□ 0.46
AP1S1P61966 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S1P61966 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
AP1S1P61966 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 TSPY19P-201ENST00000418461 509 ntBASIC17.94■□□□□ 0.46
AP1S1P61966 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 TSPY18P-201ENST00000441642 509 ntBASIC17.94■□□□□ 0.46
AP1S1P61966 AC122714.2-201ENST00000502787 707 ntBASIC17.94■□□□□ 0.46
AP1S1P61966 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.94■□□□□ 0.46
AP1S1P61966 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.94■□□□□ 0.46
AP1S1P61966 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.94■□□□□ 0.46
AP1S1P61966 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.94■□□□□ 0.46
AP1S1P61966 AC012313.10-201ENST00000623509 926 ntBASIC17.94■□□□□ 0.46
AP1S1P61966 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.94■□□□□ 0.46
AP1S1P61966 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.94■□□□□ 0.46
AP1S1P61966 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
AP1S1P61966 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S1P61966 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
AP1S1P61966 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.93■□□□□ 0.46
AP1S1P61966 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
AP1S1P61966 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.93■□□□□ 0.46
AP1S1P61966 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.93■□□□□ 0.46
AP1S1P61966 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
AP1S1P61966 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S1P61966 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms