Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH8P55286 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH8P55286 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CDH8P55286 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.04■□□□□ 0.64
CDH8P55286 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH8P55286 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH8P55286 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH8P55286 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH8P55286 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.04■□□□□ 0.64
CDH8P55286 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.04■□□□□ 0.64
CDH8P55286 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH8P55286 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.04■□□□□ 0.64
CDH8P55286 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.04■□□□□ 0.64
CDH8P55286 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH8P55286 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH8P55286 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.04■□□□□ 0.64
CDH8P55286 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH8P55286 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CDH8P55286 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH8P55286 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.04■□□□□ 0.64
CDH8P55286 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CDH8P55286 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH8P55286 TP73-AS1-210ENST00000637775 1455 ntBASIC19.03■□□□□ 0.64
CDH8P55286 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH8P55286 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDH8P55286 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CDH8P55286 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CDH8P55286 AC096633.1-201ENST00000422446 749 ntBASIC19.03■□□□□ 0.64
CDH8P55286 NUS1P1-201ENST00000446295 882 ntBASIC19.03■□□□□ 0.64
CDH8P55286 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH8P55286 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.03■□□□□ 0.64
CDH8P55286 AC096582.2-201ENST00000510860 516 ntBASIC19.03■□□□□ 0.64
CDH8P55286 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.03■□□□□ 0.64
CDH8P55286 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.03■□□□□ 0.64
CDH8P55286 PRELID1P1-202ENST00000567272 903 ntBASIC19.03■□□□□ 0.64
CDH8P55286 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH8P55286 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CDH8P55286 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH8P55286 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDH8P55286 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH8P55286 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CDH8P55286 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH8P55286 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CDH8P55286 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH8P55286 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CDH8P55286 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH8P55286 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH8P55286 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH8P55286 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH8P55286 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
CDH8P55286 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH8P55286 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CDH8P55286 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDH8P55286 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH8P55286 RCN1P2-201ENST00000398357 915 ntBASIC19.02■□□□□ 0.64
CDH8P55286 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.02■□□□□ 0.64
CDH8P55286 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH8P55286 AC007967.3-201ENST00000434308 558 ntBASIC19.02■□□□□ 0.64
CDH8P55286 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.02■□□□□ 0.64
CDH8P55286 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH8P55286 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CDH8P55286 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.02■□□□□ 0.64
CDH8P55286 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.02■□□□□ 0.64
CDH8P55286 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.02■□□□□ 0.64
CDH8P55286 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH8P55286 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH8P55286 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH8P55286 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH8P55286 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH8P55286 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH8P55286 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH8P55286 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH8P55286 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH8P55286 AC097374.2-201ENST00000618617 1306 ntBASIC19.01■□□□□ 0.63
CDH8P55286 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH8P55286 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH8P55286 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH8P55286 AC067852.2-201ENST00000590513 2313 ntBASIC19.01■□□□□ 0.63
CDH8P55286 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH8P55286 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.01■□□□□ 0.63
CDH8P55286 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH8P55286 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH8P55286 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH8P55286 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH8P55286 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH8P55286 AC068880.1-201ENST00000507289 2297 ntBASIC19.01■□□□□ 0.63
CDH8P55286 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms