Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 TP73-AS1-210ENST00000637775 1455 ntBASIC18.9■□□□□ 0.62
CACNA2D1P54289 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 AKR1C7P-201ENST00000305623 895 ntBASIC18.9■□□□□ 0.62
CACNA2D1P54289 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 AC111152.3-201ENST00000569699 673 ntBASIC18.9■□□□□ 0.62
CACNA2D1P54289 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA2D1P54289 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA2D1P54289 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
CACNA2D1P54289 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
CACNA2D1P54289 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
CACNA2D1P54289 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA2D1P54289 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CACNA2D1P54289 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 MIR5100-201ENST00000579544 119 ntBASIC18.88■□□□□ 0.61
CACNA2D1P54289 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 AC114341.1-201ENST00000618070 349 ntBASIC18.88■□□□□ 0.61
CACNA2D1P54289 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA2D1P54289 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CACNA2D1P54289 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms