Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 APLP2-208ENST00000526330 582 ntTSL 320.11■□□□□ 0.816e-14■■■□□ 17
RPS3P23396 APLP2-213ENST00000529701 573 ntTSL 520.11■□□□□ 0.816e-14■■■□□ 17
RPS3P23396 APLP2-221ENST00000533713 560 ntTSL 420.11■□□□□ 0.816e-14■■■□□ 17
RPS3P23396 APLP2-225ENST00000534761 551 ntTSL 516.2■□□□□ 0.186e-14■■■□□ 17
RPS3P23396 APLP2-211ENST00000529235 537 ntTSL 414.25□□□□□ -0.136e-14■■■□□ 17
RPS3P23396 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.17□□□□□ -0.34e-10■■■□□ 17
RPS3P23396 PSMA6-206ENST00000554541 925 ntTSL 211.22□□□□□ -0.614e-10■■■□□ 17
RPS3P23396 PSMA6-211ENST00000555764 1002 ntTSL 2 BASIC10.01□□□□□ -0.814e-10■■■□□ 17
RPS3P23396 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC7.93□□□□□ -1.144e-10■■■□□ 17
RPS3P23396 PSMA6-207ENST00000554620 790 ntTSL 57.76□□□□□ -1.174e-10■■■□□ 17
RPS3P23396 PSMA6-209ENST00000554961 814 ntTSL 27.76□□□□□ -1.174e-10■■■□□ 17
RPS3P23396 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.88□□□□□ -1.314e-10■■■□□ 17
RPS3P23396 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.394e-10■■■□□ 17
RPS3P23396 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.474e-10■■■□□ 17
RPS3P23396 AMN-203ENST00000558590 2772 ntTSL 219.45■□□□□ 0.75e-7■■■□□ 17
RPS3P23396 SEMA3B-208ENST00000456210 2065 ntTSL 218.29■□□□□ 0.522e-8■■■□□ 17
RPS3P23396 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.22■□□□□ 0.512e-8■■■□□ 17
RPS3P23396 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.14■□□□□ 0.492e-8■■■□□ 17
RPS3P23396 SEMA3B-203ENST00000419007 3283 ntTSL 214.72□□□□□ -0.052e-8■■■□□ 17
RPS3P23396 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.16□□□□□ -0.143e-10■■■□□ 17
RPS3P23396 SLC16A3-220ENST00000584781 562 ntTSL 421.79■■□□□ 1.085e-27■■■□□ 17
RPS3P23396 GLUL-209ENST00000480604 908 ntTSL 57.83□□□□□ -1.162e-12■■■□□ 17
RPS3P23396 UBC-208ENST00000540700 627 ntTSL 216.39■□□□□ 0.211e-9■■■□□ 17
RPS3P23396 UBC-214ENST00000546271 559 ntTSL 411.61□□□□□ -0.551e-9■■■□□ 17
RPS3P23396 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.14e-6■■■□□ 17
RPS3P23396 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.044e-6■■■□□ 17
RPS3P23396 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -04e-6■■■□□ 17
RPS3P23396 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC8.64□□□□□ -1.034e-6■■■□□ 17
RPS3P23396 LAPTM4B-202ENST00000517924 618 ntTSL 523.83■■□□□ 1.411e-7■■■□□ 17
RPS3P23396 ITIH3-203ENST00000463893 529 ntTSL 47.87□□□□□ -1.153e-6■■■□□ 17
RPS3P23396 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.56■■□□□ 1.042e-9■■■□□ 17
RPS3P23396 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.892e-9■■■□□ 17
RPS3P23396 TXNIP-203ENST00000488537 1509 ntTSL 56.86□□□□□ -1.314e-11■■■□□ 17
RPS3P23396 BAG6-245ENST00000437771 2407 ntTSL 515.24■□□□□ 0.033e-10■■■□□ 17
RPS3P23396 SUN2-213ENST00000464202 541 ntTSL 217.79■□□□□ 0.442e-9■■■□□ 17
RPS3P23396 PAICS-205ENST00000508554 698 ntTSL 27.65□□□□□ -1.181e-8■■■□□ 17
RPS3P23396 ELP2-215ENST00000540799 381 ntTSL 39.79□□□□□ -0.841e-6■■■□□ 17
RPS3P23396 ECI1-205ENST00000563447 965 ntTSL 215.65■□□□□ 0.11e-8■■■□□ 17
RPS3P23396 TM9SF1-211ENST00000531406 1089 ntTSL 212.24□□□□□ -0.454e-7■■■□□ 16.9
RPS3P23396 TMED9-205ENST00000510499 821 ntTSL 28.99□□□□□ -0.975e-13■■■□□ 16.9
RPS3P23396 RPA2-204ENST00000419958 554 ntTSL 35.68□□□□□ -1.54e-6■■■□□ 16.9
RPS3P23396 NDUFB4-206ENST00000496588 425 ntTSL 23.31□□□□□ -1.884e-6■■■□□ 16.9
RPS3P23396 DECR1-219ENST00000524332 645 ntTSL 22.89□□□□□ -1.954e-6■■■□□ 16.9
RPS3P23396 DECR1-210ENST00000520148 441 ntTSL 32.31□□□□□ -2.044e-6■■■□□ 16.9
RPS3P23396 GPI-204ENST00000586392 1706 ntTSL 215.2■□□□□ 0.023e-10■■■□□ 16.9
RPS3P23396 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.08■□□□□ 0.179e-14■■■□□ 16.9
RPS3P23396 G3BP1-204ENST00000517947 558 ntTSL 411.19□□□□□ -0.621e-6■■■□□ 16.9
RPS3P23396 G3BP1-210ENST00000522367 580 ntTSL 311.19□□□□□ -0.621e-6■■■□□ 16.9
RPS3P23396 GM2A-202ENST00000523004 643 ntTSL 1 (best)7.5□□□□□ -1.211e-9■■■□□ 16.9
RPS3P23396 GM2A-203ENST00000523466 553 ntTSL 37.5□□□□□ -1.211e-9■■■□□ 16.9
RPS3P23396 YIF1A-209ENST00000494836 540 ntTSL 215.89■□□□□ 0.132e-7■■■□□ 16.9
RPS3P23396 YIF1A-208ENST00000485820 653 ntTSL 214.55□□□□□ -0.082e-7■■■□□ 16.9
RPS3P23396 YIF1A-211ENST00000526497 516 ntTSL 513.81□□□□□ -0.22e-7■■■□□ 16.9
RPS3P23396 DDB1-213ENST00000539332 1767 ntTSL 28.75□□□□□ -1.015e-8■■■□□ 16.9
RPS3P23396 SLC16A3-217ENST00000583237 808 ntTSL 317.8■□□□□ 0.448e-20■■■□□ 16.9
RPS3P23396 PKM-205ENST00000561609 1568 ntTSL 1 (best)11.24□□□□□ -0.615e-15■■■□□ 16.9
RPS3P23396 WFS1-204ENST00000506588 587 ntTSL 213.74□□□□□ -0.216e-9■■■□□ 16.9
RPS3P23396 CADM1-207ENST00000537140 1646 ntTSL 1 (best)21.98■■□□□ 1.119e-10■■■□□ 16.9
RPS3P23396 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.87■■□□□ 1.099e-10■■■□□ 16.9
RPS3P23396 CADM1-218ENST00000545380 2373 ntTSL 1 (best)17.13■□□□□ 0.339e-10■■■□□ 16.9
RPS3P23396 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.97□□□□□ -0.339e-10■■■□□ 16.9
RPS3P23396 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC12.35□□□□□ -0.439e-10■■■□□ 16.9
RPS3P23396 CADM1-212ENST00000542447 4223 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.599e-10■■■□□ 16.9
RPS3P23396 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.99e-10■■■□□ 16.9
RPS3P23396 HNRNPK-207ENST00000472778 822 ntTSL 36.33□□□□□ -1.43e-7■■■□□ 16.9
RPS3P23396 WBP2-209ENST00000589236 747 ntTSL 212.9□□□□□ -0.343e-10■■■□□ 16.9
RPS3P23396 PRPF8-209ENST00000573725 749 ntTSL 56.2□□□□□ -1.421e-6■■■□□ 16.9
RPS3P23396 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.063e-9■■■□□ 16.9
RPS3P23396 PFDN5-207ENST00000549759 559 ntTSL 312.57□□□□□ -0.43e-9■■■□□ 16.9
RPS3P23396 PFDN5-204ENST00000547130 559 ntTSL 211.75□□□□□ -0.533e-9■■■□□ 16.9
RPS3P23396 PFDN5-216ENST00000552341 1980 ntTSL 210.76□□□□□ -0.693e-9■■■□□ 16.9
RPS3P23396 PFDN5-212ENST00000550880 595 ntTSL 210.43□□□□□ -0.743e-9■■■□□ 16.9
RPS3P23396 PFDN5-201ENST00000243040 564 ntTSL 1 (best)10.4□□□□□ -0.743e-9■■■□□ 16.9
RPS3P23396 PFDN5-218ENST00000552742 571 ntTSL 39.58□□□□□ -0.883e-9■■■□□ 16.9
RPS3P23396 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC8.88□□□□□ -0.993e-9■■■□□ 16.9
RPS3P23396 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.23e-9■■■□□ 16.9
RPS3P23396 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.57□□□□□ -1.23e-9■■■□□ 16.9
RPS3P23396 BOP1-204ENST00000569403 651 ntTSL 424.98■■□□□ 1.593e-6■■■□□ 16.9
RPS3P23396 CYTH2-201ENST00000325139 1087 ntTSL 224.33■■□□□ 1.493e-6■■■□□ 16.9
RPS3P23396 AP2A1-208ENST00000601356 2238 nt22.91■■□□□ 1.263e-6■■■□□ 16.9
RPS3P23396 CYTH2-202ENST00000391881 1546 ntTSL 521.7■■□□□ 1.073e-6■■■□□ 16.9
RPS3P23396 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.83e-6■■■□□ 16.9
RPS3P23396 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20■□□□□ 0.795e-7■■■□□ 16.9
RPS3P23396 UBE2E1-207ENST00000475680 1138 ntTSL 519.68■□□□□ 0.742e-11■■■□□ 16.9
RPS3P23396 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.63■□□□□ 0.733e-8■■■□□ 16.9
RPS3P23396 TCF25-208ENST00000563032 274 ntTSL 219.61■□□□□ 0.733e-6■■■□□ 16.9
RPS3P23396 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.27■□□□□ 0.685e-7■■■□□ 16.9
RPS3P23396 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.662e-11■■■□□ 16.9
RPS3P23396 TCF25-212ENST00000564652 860 ntTSL 319.02■□□□□ 0.643e-6■■■□□ 16.9
RPS3P23396 ARF5-205ENST00000467281 567 ntTSL 418.99■□□□□ 0.633e-6■■■□□ 16.9
RPS3P23396 MAEA-212ENST00000509531 1001 ntTSL 1 (best)18.99■□□□□ 0.635e-7■■■□□ 16.9
RPS3P23396 MAEA-209ENST00000506530 5371 ntTSL 218.77■□□□□ 0.63e-6■■■□□ 16.9
RPS3P23396 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.63■□□□□ 0.573e-6■■■□□ 16.9
RPS3P23396 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.2■□□□□ 0.53e-6■■■□□ 16.9
RPS3P23396 CYTH2-206ENST00000462117 540 ntTSL 418.17■□□□□ 0.53e-6■■■□□ 16.9
RPS3P23396 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.06■□□□□ 0.482e-11■■■□□ 16.9
RPS3P23396 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.97■□□□□ 0.475e-7■■■□□ 16.9
RPS3P23396 NFE2L1-205ENST00000577411 562 ntTSL 517.93■□□□□ 0.466e-8■■■□□ 16.9
RPS3P23396 MYADM-207ENST00000421337 1009 ntTSL 217.81■□□□□ 0.441e-8■■■□□ 16.9
RPS3P23396 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.75■□□□□ 0.435e-7■■■□□ 16.9
Retrieved 100 of 24,271 protein–RNA pairs in 218.3 ms