RNA–Protein interactions for RNA: ENST00000496588.1

NDUFB4-206, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 425 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-206ENST00000496588 AEBP2Q6ZN18 517 aaPredicted RBP30.9■■■□□ 2.54
NDUFB4-206ENST00000496588 CHIC1Q5VXU3 224 aa29.97■■■□□ 2.39
NDUFB4-206ENST00000496588 SENP3Q9H4L4 574 aaPredicted RBP26.47■■□□□ 1.83
NDUFB4-206ENST00000496588 PHF23Q9BUL5 403 aaPredicted RBP26.22■■□□□ 1.79
NDUFB4-206ENST00000496588 FOXD1Q16676 465 aa24.48■■□□□ 1.51
NDUFB4-206ENST00000496588 PLPPR3Q6T4P5 718 aa24.28■■□□□ 1.48
NDUFB4-206ENST00000496588 ADRA2BP18089 450 aa23.23■■□□□ 1.31
NDUFB4-206ENST00000496588 PPP6R1Q9UPN7 881 aa23.23■■□□□ 1.31
NDUFB4-206ENST00000496588 PIAS4Q8N2W9 510 aaPredicted RBP23.07■■□□□ 1.28
NDUFB4-206ENST00000496588 MSH5O43196 834 aa22.86■■□□□ 1.25
NDUFB4-206ENST00000496588 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
NDUFB4-206ENST00000496588 PPP4R3CPQ6ZMV5 832 aa21.28■■□□□ 1
NDUFB4-206ENST00000496588 POTEDQ86YR6 584 aa21.27■■□□□ 1
NDUFB4-206ENST00000496588 MAPK8IP2Q13387 824 aaPredicted RBP21.13■□□□□ 0.97
NDUFB4-206ENST00000496588 DMRT2Q9Y5R5 561 aa21.02■□□□□ 0.96
NDUFB4-206ENST00000496588 CNKSR2Q8WXI2 1034 aa20.82■□□□□ 0.92
NDUFB4-206ENST00000496588 NCBP3Q53F19 620 aaKnown RBP20.77■□□□□ 0.92
NDUFB4-206ENST00000496588 RNF216Q9NWF9 866 aaPredicted RBP20.49■□□□□ 0.87
NDUFB4-206ENST00000496588 HOXD11P31277 338 aaPredicted RBP20.46■□□□□ 0.87
NDUFB4-206ENST00000496588 KCNA4P22459 653 aa20.35■□□□□ 0.85
NDUFB4-206ENST00000496588 NPM3O75607 178 aaKnown RBP20.3■□□□□ 0.84
NDUFB4-206ENST00000496588 DCAF8L1A6NGE4 600 aa20.16■□□□□ 0.82
NDUFB4-206ENST00000496588 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
NDUFB4-206ENST00000496588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.726e-6■□□□□ 11
NDUFB4-206ENST00000496588 RNF39Q9H2S5 420 aa19.47■□□□□ 0.71
NDUFB4-206ENST00000496588 SLC4A1APQ9BWU0 796 aaKnown RBP19.41■□□□□ 0.7
NDUFB4-206ENST00000496588 C1QBPQ07021 282 aaKnown RBP19.29■□□□□ 0.68
NDUFB4-206ENST00000496588 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
NDUFB4-206ENST00000496588 SLC4A2P04920 1241 aa19.2■□□□□ 0.66
NDUFB4-206ENST00000496588 U3KPZ7 1027 aaPredicted RBP19.1■□□□□ 0.65
NDUFB4-206ENST00000496588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
NDUFB4-206ENST00000496588 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
NDUFB4-206ENST00000496588 FOXD4L1Q9NU39 408 aa18.92■□□□□ 0.62
NDUFB4-206ENST00000496588 APLP2Q06481 763 aa18.88■□□□□ 0.61
NDUFB4-206ENST00000496588 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
NDUFB4-206ENST00000496588 SAMD1Q6SPF0 538 aaPredicted RBP18.81■□□□□ 0.6
NDUFB4-206ENST00000496588 CAPN15O75808 1086 aa18.68■□□□□ 0.58
NDUFB4-206ENST00000496588 ZBTB22O15209 634 aa18.65■□□□□ 0.58
NDUFB4-206ENST00000496588 SPINK5Q9NQ38 1064 aaPredicted RBP18.64■□□□□ 0.57
NDUFB4-206ENST00000496588 ZNF219Q9P2Y4 722 aaPredicted RBP18.57■□□□□ 0.56
NDUFB4-206ENST00000496588 TRHP20396 242 aaPredicted RBP18.49■□□□□ 0.55
NDUFB4-206ENST00000496588 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
NDUFB4-206ENST00000496588 DSG3P32926 999 aa18.39■□□□□ 0.53
NDUFB4-206ENST00000496588 ATXN8OSP0DMR3 200 aa18.36■□□□□ 0.53
NDUFB4-206ENST00000496588 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.52
NDUFB4-206ENST00000496588 ABCB7O75027 752 aa18.22■□□□□ 0.51
NDUFB4-206ENST00000496588 ATF5Q9Y2D1 282 aaPredicted RBP18.2■□□□□ 0.5
NDUFB4-206ENST00000496588 POLA2Q14181 598 aa18.11■□□□□ 0.49
NDUFB4-206ENST00000496588 ZBTB12Q9Y330 459 aaPredicted RBP17.94■□□□□ 0.46
NDUFB4-206ENST00000496588 FBLN2P98095 1184 aa17.69■□□□□ 0.42
NDUFB4-206ENST00000496588 RBM42Q9BTD8 480 aaKnown RBP17.69■□□□□ 0.42
NDUFB4-206ENST00000496588 OSCARQ8IYS5 282 aa17.48■□□□□ 0.39
NDUFB4-206ENST00000496588 MKRN4PQ13434 485 aaPredicted RBP17.42■□□□□ 0.38
NDUFB4-206ENST00000496588 SPDYE2BA6NHP3 402 aa17.35■□□□□ 0.37
NDUFB4-206ENST00000496588 SPDYE6P0CI01 402 aa17.35■□□□□ 0.37
NDUFB4-206ENST00000496588 SPDYE2Q495Y8 402 aa17.35■□□□□ 0.37
NDUFB4-206ENST00000496588 AKT1S1Q96B36 256 aa17.33■□□□□ 0.36
NDUFB4-206ENST00000496588 ZNF692Q9BU19 519 aaPredicted RBP17.21■□□□□ 0.35
NDUFB4-206ENST00000496588 REM2Q8IYK8 340 aaPredicted RBP17.11■□□□□ 0.33
NDUFB4-206ENST00000496588 SSUH2Q9Y2M2 353 aa17.11■□□□□ 0.33
NDUFB4-206ENST00000496588 SPDYE4A6NLX3 237 aa16.98■□□□□ 0.31
NDUFB4-206ENST00000496588 CHRDL2Q6WN34 429 aa16.98■□□□□ 0.31
NDUFB4-206ENST00000496588 PABPN1Q86U42 306 aaKnown RBP eCLIP16.93■□□□□ 0.3
NDUFB4-206ENST00000496588 SPDYE1Q8NFV5 336 aaPredicted RBP16.93■□□□□ 0.3
NDUFB4-206ENST00000496588 PITPNM1O00562 1244 aa16.9■□□□□ 0.3
NDUFB4-206ENST00000496588 CLEC11AQ9Y240 323 aa16.82■□□□□ 0.28
NDUFB4-206ENST00000496588 POTEHQ6S545 545 aa16.81■□□□□ 0.28
NDUFB4-206ENST00000496588 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
NDUFB4-206ENST00000496588 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
NDUFB4-206ENST00000496588 FXR2P51116 673 aaKnown RBP eCLIP16.66■□□□□ 0.26
NDUFB4-206ENST00000496588 FKBP8Q14318 412 aa16.65■□□□□ 0.26
NDUFB4-206ENST00000496588 PIP4P2Q8N4L2 257 aa16.65■□□□□ 0.26
NDUFB4-206ENST00000496588 PROM2Q8N271 834 aa16.61■□□□□ 0.25
NDUFB4-206ENST00000496588 PRKAR2AP13861 404 aaKnown RBP16.5■□□□□ 0.23
NDUFB4-206ENST00000496588 CHADLQ6NUI6 762 aa16.36■□□□□ 0.21
NDUFB4-206ENST00000496588 FBXO3Q9UK99 471 aa16.3■□□□□ 0.2
NDUFB4-206ENST00000496588 HAX1O00165 279 aa16.27■□□□□ 0.2
NDUFB4-206ENST00000496588 CREBZFQ9NS37 354 aa16.27■□□□□ 0.2
NDUFB4-206ENST00000496588 PLEKHG5O94827 1062 aa16.25■□□□□ 0.19
NDUFB4-206ENST00000496588 FARP1Q9Y4F1 1045 aaPredicted RBP16.24■□□□□ 0.19
NDUFB4-206ENST00000496588 MIER1Q8N108 512 aa16.17■□□□□ 0.18
NDUFB4-206ENST00000496588 NPM1P06748 294 aaKnown RBP eCLIP16.15■□□□□ 0.18
NDUFB4-206ENST00000496588 PLCD3Q8N3E9 789 aa16.13■□□□□ 0.17
NDUFB4-206ENST00000496588 C19orf67A6NJJ6 358 aa16.11■□□□□ 0.17
NDUFB4-206ENST00000496588 ZBTB47Q9UFB7 747 aaPredicted RBP16.07■□□□□ 0.16
NDUFB4-206ENST00000496588 MNX1P50219 401 aaPredicted RBP16.03■□□□□ 0.16
NDUFB4-206ENST00000496588 CD44P16070 742 aaKnown RBP16.02■□□□□ 0.16
NDUFB4-206ENST00000496588 SP7Q8TDD2 431 aaPredicted RBP16.02■□□□□ 0.16
NDUFB4-206ENST00000496588 PAK3O75914 559 aaPredicted RBP15.99■□□□□ 0.15
NDUFB4-206ENST00000496588 VASPP50552 380 aaPredicted RBP15.97■□□□□ 0.15
NDUFB4-206ENST00000496588 EVX2Q03828 476 aa15.94■□□□□ 0.14
NDUFB4-206ENST00000496588 CLCN6P51797 869 aa15.87■□□□□ 0.13
NDUFB4-206ENST00000496588 ZRANB1Q9UGI0 708 aa15.87■□□□□ 0.13
NDUFB4-206ENST00000496588 KLHL34Q8N239 644 aa15.83■□□□□ 0.12
NDUFB4-206ENST00000496588 ZNF579Q8NAF0 562 aaKnown RBP15.8■□□□□ 0.12
NDUFB4-206ENST00000496588 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
NDUFB4-206ENST00000496588 GABBR2O75899 941 aa15.73■□□□□ 0.11
NDUFB4-206ENST00000496588 NUBP1P53384 320 aa15.71■□□□□ 0.11
NDUFB4-206ENST00000496588 RASEFQ8IZ41 740 aa15.71■□□□□ 0.11
NDUFB4-206ENST00000496588 FAM212AQ96EL1 285 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms