Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.54■□□□□ 0.56
MSI1O43347 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
MSI1O43347 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.54■□□□□ 0.56
MSI1O43347 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
MSI1O43347 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
MSI1O43347 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
MSI1O43347 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.53■□□□□ 0.56
MSI1O43347 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
MSI1O43347 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.53■□□□□ 0.56
MSI1O43347 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.53■□□□□ 0.56
MSI1O43347 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MSI1O43347 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
MSI1O43347 AC007967.3-201ENST00000434308 558 ntBASIC18.53■□□□□ 0.56
MSI1O43347 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.53■□□□□ 0.56
MSI1O43347 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.53■□□□□ 0.56
MSI1O43347 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.53■□□□□ 0.56
MSI1O43347 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.53■□□□□ 0.56
MSI1O43347 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.53■□□□□ 0.56
MSI1O43347 AC111152.3-201ENST00000569699 673 ntBASIC18.53■□□□□ 0.56
MSI1O43347 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.53■□□□□ 0.56
MSI1O43347 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.53■□□□□ 0.56
MSI1O43347 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.53■□□□□ 0.56
MSI1O43347 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.53■□□□□ 0.56
MSI1O43347 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.53■□□□□ 0.56
MSI1O43347 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.53■□□□□ 0.56
MSI1O43347 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSI1O43347 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
MSI1O43347 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.52■□□□□ 0.56
MSI1O43347 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MSI1O43347 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MSI1O43347 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
MSI1O43347 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MSI1O43347 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MSI1O43347 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.52■□□□□ 0.56
MSI1O43347 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.52■□□□□ 0.56
MSI1O43347 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MSI1O43347 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.52■□□□□ 0.56
MSI1O43347 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.52■□□□□ 0.56
MSI1O43347 POM121L3P-201ENST00000419331 1163 ntBASIC18.52■□□□□ 0.56
MSI1O43347 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.52■□□□□ 0.56
MSI1O43347 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.52■□□□□ 0.56
MSI1O43347 AC009533.2-201ENST00000543664 586 ntBASIC18.52■□□□□ 0.56
MSI1O43347 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.52■□□□□ 0.56
MSI1O43347 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MSI1O43347 RN7SL510P-201ENST00000581311 263 ntBASIC18.52■□□□□ 0.56
MSI1O43347 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.52■□□□□ 0.56
MSI1O43347 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MSI1O43347 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
MSI1O43347 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.52■□□□□ 0.56
MSI1O43347 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MSI1O43347 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.52■□□□□ 0.56
MSI1O43347 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MSI1O43347 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.52■□□□□ 0.56
MSI1O43347 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MSI1O43347 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MSI1O43347 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MSI1O43347 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MSI1O43347 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MSI1O43347 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.51■□□□□ 0.55
MSI1O43347 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MSI1O43347 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
MSI1O43347 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
MSI1O43347 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MSI1O43347 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MSI1O43347 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.51■□□□□ 0.55
MSI1O43347 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MSI1O43347 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.51■□□□□ 0.55
MSI1O43347 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.51■□□□□ 0.55
MSI1O43347 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MSI1O43347 KRT16P4-201ENST00000453883 522 ntBASIC18.51■□□□□ 0.55
MSI1O43347 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.51■□□□□ 0.55
MSI1O43347 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.51■□□□□ 0.55
MSI1O43347 MIR5100-201ENST00000579544 119 ntBASIC18.51■□□□□ 0.55
MSI1O43347 AC011467.2-201ENST00000598425 242 ntBASIC18.51■□□□□ 0.55
MSI1O43347 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MSI1O43347 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.51■□□□□ 0.55
MSI1O43347 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MSI1O43347 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MSI1O43347 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms