Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 AL359075.1-203ENST00000462729 1002 ntBASIC20.4■□□□□ 0.86
CLIC4Q9Y696 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 HYMAI.1-201ENST00000620949 238 ntBASIC20.4■□□□□ 0.86
CLIC4Q9Y696 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.39■□□□□ 0.86
CLIC4Q9Y696 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
CLIC4Q9Y696 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.39■□□□□ 0.86
CLIC4Q9Y696 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CLIC4Q9Y696 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLIC4Q9Y696 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLIC4Q9Y696 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLIC4Q9Y696 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 HBZP1-201ENST00000354915 429 ntBASIC20.39■□□□□ 0.85
CLIC4Q9Y696 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 IGHGP-201ENST00000390555 1178 ntBASIC20.39■□□□□ 0.85
CLIC4Q9Y696 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 CROCCP2-202ENST00000412962 2773 ntBASIC20.39■□□□□ 0.85
CLIC4Q9Y696 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC4Q9Y696 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 MIR662-201ENST00000384847 95 ntBASIC20.38■□□□□ 0.85
CLIC4Q9Y696 RNF152P1-201ENST00000397754 604 ntBASIC20.38■□□□□ 0.85
CLIC4Q9Y696 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 AC104076.2-201ENST00000448912 469 ntBASIC20.38■□□□□ 0.85
CLIC4Q9Y696 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 VENTXP5-201ENST00000523979 775 ntBASIC20.38■□□□□ 0.85
CLIC4Q9Y696 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 AC009154.2-201ENST00000621177 724 ntBASIC20.38■□□□□ 0.85
CLIC4Q9Y696 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.38■□□□□ 0.85
CLIC4Q9Y696 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 FAM8A6P-201ENST00000407496 1135 ntBASIC20.37■□□□□ 0.85
CLIC4Q9Y696 TSPY12P-201ENST00000421279 868 ntBASIC20.37■□□□□ 0.85
CLIC4Q9Y696 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 AC112907.2-201ENST00000448639 330 ntBASIC20.37■□□□□ 0.85
CLIC4Q9Y696 AP003733.1-201ENST00000491725 852 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms