Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 RARRES2P6-201ENST00000567333 442 ntBASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 AL163051.1-201ENST00000569214 1512 ntBASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 AC106886.4-201ENST00000623557 2502 ntBASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 AL023284.2-201ENST00000405850 579 ntBASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 MCCD1P1-208ENST00000445732 328 ntBASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RCL1Q9Y2P8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 NIFKP9-201ENST00000419265 221 ntBASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 KRT16P5-201ENST00000455284 522 ntBASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms