Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FNDC3AQ9Y2H6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 AC138894.3-201ENST00000603787 634 ntBASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 AC023511.2-201ENST00000618803 211 ntBASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
FNDC3AQ9Y2H6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 AC104819.1-201ENST00000504587 486 ntBASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 AP002469.2-201ENST00000531724 424 ntBASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 AC005332.3-201ENST00000589904 676 ntBASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
FNDC3AQ9Y2H6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 MIR3180-4-201ENST00000582223 153 ntBASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 SLC25A6P4-201ENST00000586535 553 ntBASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FNDC3AQ9Y2H6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FNDC3AQ9Y2H6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
FNDC3AQ9Y2H6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
FNDC3AQ9Y2H6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms