Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 AC006449.5-201ENST00000610658 2098 ntBASIC14.5□□□□□ -0.09
NKX6-2Q9C056 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 GPX1P1-201ENST00000388829 606 ntBASIC14.5□□□□□ -0.09
NKX6-2Q9C056 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 AL512625.2-201ENST00000417533 625 ntBASIC14.5□□□□□ -0.09
NKX6-2Q9C056 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 AC005837.3-201ENST00000612163 286 ntBASIC14.5□□□□□ -0.09
NKX6-2Q9C056 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NKX6-2Q9C056 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-2Q9C056 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 AL138688.1-201ENST00000624851 1594 ntBASIC14.48□□□□□ -0.09
NKX6-2Q9C056 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-2Q9C056 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms