Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHCHD1Q96BP2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
CHCHD1Q96BP2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHCHD1Q96BP2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHCHD1Q96BP2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
CHCHD1Q96BP2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.02□□□□□ -0.32
CHCHD1Q96BP2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHCHD1Q96BP2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
CHCHD1Q96BP2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHCHD1Q96BP2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.02□□□□□ -0.32
CHCHD1Q96BP2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHCHD1Q96BP2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CHCHD1Q96BP2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 AL356441.2-201ENST00000443009 864 ntBASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 AC005829.2-201ENST00000571422 1056 ntBASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 AC069236.1-201ENST00000604339 616 ntBASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.02□□□□□ -0.33
CHCHD1Q96BP2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 RPS2P52-201ENST00000469610 820 ntBASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 AL121832.2-201ENST00000610979 668 ntBASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHCHD1Q96BP2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13□□□□□ -0.33
CHCHD1Q96BP2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CHCHD1Q96BP2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms