Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 AC024909.3-201ENST00000611513 2257 ntBASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 PAUPAR-201ENST00000630360 2965 ntBASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.71■□□□□ 0.1
LYSMD2Q8IV50 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LYSMD2Q8IV50 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
LYSMD2Q8IV50 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LYSMD2Q8IV50 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LYSMD2Q8IV50 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.71■□□□□ 0.1
LYSMD2Q8IV50 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 AC091874.3-201ENST00000512672 1195 ntBASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD2Q8IV50 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 AC005915.1-201ENST00000624912 2018 ntBASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
LYSMD2Q8IV50 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms