Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AC010203.1-204ENST00000548782 407 ntBASIC17.42■□□□□ 0.38
SGO1Q5FBB7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 AL138966.2-201ENST00000621997 464 ntBASIC17.42■□□□□ 0.38
SGO1Q5FBB7 AC133561.5-201ENST00000635547 218 ntBASIC17.42■□□□□ 0.38
SGO1Q5FBB7 LINC00602-201ENST00000629776 2065 ntBASIC17.42■□□□□ 0.38
SGO1Q5FBB7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 AC100803.2-201ENST00000562459 1963 ntBASIC17.42■□□□□ 0.38
SGO1Q5FBB7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 AC006116.8-202ENST00000587620 1550 ntBASIC17.41■□□□□ 0.38
SGO1Q5FBB7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGO1Q5FBB7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 PVRIG2P-201ENST00000435460 978 ntBASIC17.4■□□□□ 0.38
SGO1Q5FBB7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.4■□□□□ 0.38
SGO1Q5FBB7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SGO1Q5FBB7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.39■□□□□ 0.38
SGO1Q5FBB7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SGO1Q5FBB7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms