Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
GABREP78334 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
GABREP78334 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GABREP78334 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
GABREP78334 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.95■□□□□ 0.3
GABREP78334 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.95■□□□□ 0.3
GABREP78334 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
GABREP78334 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
GABREP78334 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.95■□□□□ 0.3
GABREP78334 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.95■□□□□ 0.3
GABREP78334 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.95■□□□□ 0.3
GABREP78334 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.95■□□□□ 0.3
GABREP78334 AC007967.3-201ENST00000434308 558 ntBASIC16.95■□□□□ 0.3
GABREP78334 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.95■□□□□ 0.3
GABREP78334 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.95■□□□□ 0.3
GABREP78334 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.95■□□□□ 0.3
GABREP78334 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.95■□□□□ 0.3
GABREP78334 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.95■□□□□ 0.3
GABREP78334 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.95■□□□□ 0.3
GABREP78334 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.95■□□□□ 0.3
GABREP78334 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.95■□□□□ 0.3
GABREP78334 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABREP78334 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GABREP78334 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABREP78334 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABREP78334 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GABREP78334 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GABREP78334 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABREP78334 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
GABREP78334 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABREP78334 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.94■□□□□ 0.3
GABREP78334 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.94■□□□□ 0.3
GABREP78334 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.94■□□□□ 0.3
GABREP78334 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.94■□□□□ 0.3
GABREP78334 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.94■□□□□ 0.3
GABREP78334 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.94■□□□□ 0.3
GABREP78334 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
GABREP78334 SNHG9-202ENST00000564014 471 ntBASIC16.94■□□□□ 0.3
GABREP78334 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.94■□□□□ 0.3
GABREP78334 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.94■□□□□ 0.3
GABREP78334 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.94■□□□□ 0.3
GABREP78334 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABREP78334 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABREP78334 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABREP78334 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABREP78334 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABREP78334 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABREP78334 AL049812.1-201ENST00000432563 2267 ntBASIC16.94■□□□□ 0.3
GABREP78334 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.93■□□□□ 0.3
GABREP78334 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.93■□□□□ 0.3
GABREP78334 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.93■□□□□ 0.3
GABREP78334 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GABREP78334 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.93■□□□□ 0.3
GABREP78334 KRT18P27-201ENST00000427733 1299 ntBASIC16.93■□□□□ 0.3
GABREP78334 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 AC136632.2-201ENST00000512891 861 ntBASIC16.93■□□□□ 0.3
GABREP78334 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.93■□□□□ 0.3
GABREP78334 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.93■□□□□ 0.3
GABREP78334 AC005829.1-201ENST00000570002 483 ntBASIC16.93■□□□□ 0.3
GABREP78334 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.93■□□□□ 0.3
GABREP78334 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
GABREP78334 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.93■□□□□ 0.3
GABREP78334 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.93■□□□□ 0.3
GABREP78334 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GABREP78334 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABREP78334 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms