Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BDP58876 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 TSPY26P-201ENST00000476365 1326 ntBASIC13.47□□□□□ -0.25
HIST1H2BDP58876 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 AC006058.4-201ENST00000624016 1670 ntBASIC13.47□□□□□ -0.25
HIST1H2BDP58876 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2BDP58876 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.46□□□□□ -0.25
HIST1H2BDP58876 LINC00304-203ENST00000565008 1864 ntBASIC13.46□□□□□ -0.25
HIST1H2BDP58876 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 AC078925.2-201ENST00000624013 1973 ntBASIC13.46□□□□□ -0.25
HIST1H2BDP58876 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.46□□□□□ -0.25
HIST1H2BDP58876 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
HIST1H2BDP58876 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.46□□□□□ -0.26
HIST1H2BDP58876 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms