Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.26■□□□□ 0.51
CDH4P55283 IFNL4P1-201ENST00000607083 540 ntBASIC18.26■□□□□ 0.51
CDH4P55283 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDH4P55283 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH4P55283 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH4P55283 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH4P55283 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH4P55283 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH4P55283 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH4P55283 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH4P55283 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CDH4P55283 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH4P55283 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH4P55283 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH4P55283 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH4P55283 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH4P55283 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH4P55283 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH4P55283 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH4P55283 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDH4P55283 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH4P55283 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH4P55283 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH4P55283 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH4P55283 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH4P55283 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH4P55283 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH4P55283 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CDH4P55283 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH4P55283 AL691432.3-201ENST00000621860 400 ntBASIC18.25■□□□□ 0.51
CDH4P55283 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDH4P55283 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH4P55283 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH4P55283 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 AC009949.1-201ENST00000623048 1830 ntBASIC18.25■□□□□ 0.51
CDH4P55283 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH4P55283 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CDH4P55283 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDH4P55283 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH4P55283 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH4P55283 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDH4P55283 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH4P55283 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CDH4P55283 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDH4P55283 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH4P55283 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH4P55283 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH4P55283 COX5BP2-201ENST00000392354 334 ntBASIC18.24■□□□□ 0.51
CDH4P55283 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.24■□□□□ 0.51
CDH4P55283 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.24■□□□□ 0.51
CDH4P55283 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.24■□□□□ 0.51
CDH4P55283 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 SLC25A6P5-201ENST00000435663 894 ntBASIC18.24■□□□□ 0.51
CDH4P55283 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH4P55283 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 AC122714.2-201ENST00000502787 707 ntBASIC18.24■□□□□ 0.51
CDH4P55283 UNC93B7-201ENST00000509439 705 ntBASIC18.24■□□□□ 0.51
CDH4P55283 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH4P55283 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH4P55283 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH4P55283 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH4P55283 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH4P55283 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH4P55283 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH4P55283 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH4P55283 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH4P55283 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH4P55283 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH4P55283 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH4P55283 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH4P55283 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH4P55283 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms