Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.58■□□□□ 0.72
CDR1P51861 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.58■□□□□ 0.72
CDR1P51861 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDR1P51861 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CDR1P51861 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDR1P51861 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDR1P51861 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CDR1P51861 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDR1P51861 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDR1P51861 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDR1P51861 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDR1P51861 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.57■□□□□ 0.72
CDR1P51861 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CDR1P51861 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CDR1P51861 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.57■□□□□ 0.72
CDR1P51861 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.57■□□□□ 0.72
CDR1P51861 AC126763.1-201ENST00000552015 2118 ntBASIC19.57■□□□□ 0.72
CDR1P51861 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDR1P51861 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDR1P51861 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.57■□□□□ 0.72
CDR1P51861 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDR1P51861 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.57■□□□□ 0.72
CDR1P51861 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDR1P51861 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CDR1P51861 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDR1P51861 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDR1P51861 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.57■□□□□ 0.72
CDR1P51861 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDR1P51861 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.56■□□□□ 0.72
CDR1P51861 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
CDR1P51861 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CDR1P51861 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDR1P51861 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.56■□□□□ 0.72
CDR1P51861 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 Z83836.1-201ENST00000624605 1642 ntBASIC19.56■□□□□ 0.72
CDR1P51861 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CDR1P51861 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CDR1P51861 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.56■□□□□ 0.72
CDR1P51861 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.56■□□□□ 0.72
CDR1P51861 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDR1P51861 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDR1P51861 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDR1P51861 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.55■□□□□ 0.72
CDR1P51861 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CDR1P51861 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDR1P51861 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDR1P51861 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CDR1P51861 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDR1P51861 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.55■□□□□ 0.72
CDR1P51861 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.55■□□□□ 0.72
CDR1P51861 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDR1P51861 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.55■□□□□ 0.72
CDR1P51861 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDR1P51861 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CDR1P51861 ABALON-201ENST00000629058 1903 ntBASIC19.55■□□□□ 0.72
CDR1P51861 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CDR1P51861 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.54■□□□□ 0.72
CDR1P51861 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.54■□□□□ 0.72
CDR1P51861 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.54■□□□□ 0.72
CDR1P51861 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.54■□□□□ 0.72
CDR1P51861 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CDR1P51861 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDR1P51861 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CDR1P51861 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 TSPY22P-201ENST00000427496 604 ntBASIC19.54■□□□□ 0.72
CDR1P51861 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDR1P51861 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms