Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.19□□□□□ -0.14
IFNA1P01562 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.19□□□□□ -0.14
IFNA1P01562 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
IFNA1P01562 AC106886.4-201ENST00000623557 2502 ntBASIC14.19□□□□□ -0.14
IFNA1P01562 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
IFNA1P01562 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
IFNA1P01562 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.19□□□□□ -0.14
IFNA1P01562 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.19□□□□□ -0.14
IFNA1P01562 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.19□□□□□ -0.14
IFNA1P01562 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
IFNA1P01562 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.18□□□□□ -0.14
IFNA1P01562 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
IFNA1P01562 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
IFNA1P01562 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
IFNA1P01562 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
IFNA1P01562 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.18□□□□□ -0.14
IFNA1P01562 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.18□□□□□ -0.14
IFNA1P01562 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.18□□□□□ -0.14
IFNA1P01562 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.18□□□□□ -0.14
IFNA1P01562 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.18□□□□□ -0.14
IFNA1P01562 AC006557.6-201ENST00000623071 864 ntBASIC14.18□□□□□ -0.14
IFNA1P01562 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.18□□□□□ -0.14
IFNA1P01562 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.18□□□□□ -0.14
IFNA1P01562 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
IFNA1P01562 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
IFNA1P01562 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
IFNA1P01562 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.18□□□□□ -0.14
IFNA1P01562 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
IFNA1P01562 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.18□□□□□ -0.14
IFNA1P01562 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.18□□□□□ -0.14
IFNA1P01562 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
IFNA1P01562 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFNA1P01562 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
IFNA1P01562 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
IFNA1P01562 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
IFNA1P01562 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.17□□□□□ -0.14
IFNA1P01562 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
IFNA1P01562 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
IFNA1P01562 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.17□□□□□ -0.14
IFNA1P01562 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
IFNA1P01562 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.17□□□□□ -0.14
IFNA1P01562 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.17□□□□□ -0.14
IFNA1P01562 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.17□□□□□ -0.14
IFNA1P01562 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.17□□□□□ -0.14
IFNA1P01562 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFNA1P01562 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
IFNA1P01562 RCC2P3-201ENST00000418112 1537 ntBASIC14.16□□□□□ -0.14
IFNA1P01562 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms