Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN5O00501 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN5O00501 AC009949.1-201ENST00000623048 1830 ntBASIC18.86■□□□□ 0.61
CLDN5O00501 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN5O00501 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN5O00501 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
CLDN5O00501 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN5O00501 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN5O00501 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CLDN5O00501 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLDN5O00501 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLDN5O00501 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CLDN5O00501 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 INTS4P1-201ENST00000438455 1935 ntBASIC18.85■□□□□ 0.61
CLDN5O00501 AKR1C7P-201ENST00000305623 895 ntBASIC18.85■□□□□ 0.61
CLDN5O00501 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN5O00501 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN5O00501 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN5O00501 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.85■□□□□ 0.61
CLDN5O00501 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN5O00501 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN5O00501 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLDN5O00501 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN5O00501 AL390961.4-201ENST00000623958 2535 ntBASIC18.84■□□□□ 0.61
CLDN5O00501 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN5O00501 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN5O00501 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN5O00501 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CLDN5O00501 AC096633.1-201ENST00000422446 749 ntBASIC18.84■□□□□ 0.61
CLDN5O00501 AC132008.2-207ENST00000454517 770 ntBASIC18.84■□□□□ 0.61
CLDN5O00501 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.84■□□□□ 0.61
CLDN5O00501 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN5O00501 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN5O00501 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN5O00501 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLDN5O00501 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLDN5O00501 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN5O00501 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN5O00501 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN5O00501 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
CLDN5O00501 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN5O00501 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN5O00501 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.83■□□□□ 0.61
CLDN5O00501 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN5O00501 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN5O00501 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CLDN5O00501 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.83■□□□□ 0.61
CLDN5O00501 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN5O00501 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN5O00501 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN5O00501 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN5O00501 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN5O00501 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN5O00501 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN5O00501 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLDN5O00501 TPM4P1-201ENST00000436100 807 ntBASIC18.83■□□□□ 0.6
CLDN5O00501 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN5O00501 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN5O00501 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN5O00501 LINC01711-201ENST00000598340 967 ntBASIC18.83■□□□□ 0.6
CLDN5O00501 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN5O00501 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN5O00501 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN5O00501 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN5O00501 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN5O00501 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN5O00501 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN5O00501 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN5O00501 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms