Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.62□□□□□ -0.39
LINC01546A6NGU7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 AIRN-201ENST00000601203 4374 ntBASIC12.62□□□□□ -0.39
LINC01546A6NGU7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 AC097658.1-201ENST00000475555 843 ntBASIC12.61□□□□□ -0.39
LINC01546A6NGU7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 MIR3180-4-201ENST00000582223 153 ntBASIC12.61□□□□□ -0.39
LINC01546A6NGU7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01546A6NGU7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 RNF216P1-203ENST00000404404 2427 ntBASIC12.6□□□□□ -0.39
LINC01546A6NGU7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 MIR638-201ENST00000385237 100 ntBASIC12.6□□□□□ -0.39
LINC01546A6NGU7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 AC004911.1-201ENST00000416316 871 ntBASIC12.6□□□□□ -0.39
LINC01546A6NGU7 AC005104.2-201ENST00000427818 678 ntBASIC12.6□□□□□ -0.39
LINC01546A6NGU7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 KRT16P5-201ENST00000455284 522 ntBASIC12.6□□□□□ -0.39
LINC01546A6NGU7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms