Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 IGLL3P-201ENST00000412472 434 ntBASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 AP006288.1-201ENST00000446065 395 ntBASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 AC116407.2-201ENST00000613639 860 ntBASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 AC135776.1-201ENST00000319817 2481 ntBASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 EFTUD1P1-204ENST00000560401 1798 ntBASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 HCG4B-203ENST00000450128 991 ntBASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 RFPL4AP1-201ENST00000530883 850 ntBASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 AC010654.1-201ENST00000615722 808 ntBASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
SHANK2Q9UPX8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 COA5-202ENST00000409997 557 ntTSL 4 BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 SIGLEC30P-201ENST00000455569 941 ntBASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 YBX1P5-201ENST00000509441 847 ntBASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 AL138781.2-201ENST00000617896 1843 ntBASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC26.4■■□□□ 1.82
SHANK2Q9UPX8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 MCCD1P2-201ENST00000423228 335 ntBASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 AL353135.1-201ENST00000606729 504 ntBASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC26.39■■□□□ 1.82
SHANK2Q9UPX8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
SHANK2Q9UPX8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC26.39■■□□□ 1.81
SHANK2Q9UPX8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC26.39■■□□□ 1.81
SHANK2Q9UPX8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHANK2Q9UPX8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms