Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SUSD3Q96L08 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SUSD3Q96L08 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUSD3Q96L08 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SUSD3Q96L08 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUSD3Q96L08 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.9■□□□□ 0.62
SUSD3Q96L08 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.9■□□□□ 0.62
SUSD3Q96L08 RPS2P1-201ENST00000434010 821 ntBASIC18.9■□□□□ 0.62
SUSD3Q96L08 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SUSD3Q96L08 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.9■□□□□ 0.62
SUSD3Q96L08 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.9■□□□□ 0.62
SUSD3Q96L08 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.9■□□□□ 0.62
SUSD3Q96L08 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.9■□□□□ 0.62
SUSD3Q96L08 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUSD3Q96L08 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SUSD3Q96L08 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUSD3Q96L08 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SUSD3Q96L08 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUSD3Q96L08 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.9■□□□□ 0.62
SUSD3Q96L08 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUSD3Q96L08 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SUSD3Q96L08 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.9■□□□□ 0.62
SUSD3Q96L08 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SUSD3Q96L08 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUSD3Q96L08 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SUSD3Q96L08 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.89■□□□□ 0.62
SUSD3Q96L08 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SUSD3Q96L08 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SUSD3Q96L08 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SUSD3Q96L08 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SUSD3Q96L08 AP000997.3-201ENST00000623333 2250 ntBASIC18.89■□□□□ 0.61
SUSD3Q96L08 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SUSD3Q96L08 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.89■□□□□ 0.61
SUSD3Q96L08 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SUSD3Q96L08 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SUSD3Q96L08 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 DDX43P3-201ENST00000441064 443 ntBASIC18.89■□□□□ 0.61
SUSD3Q96L08 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SUSD3Q96L08 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 MTDHP4-201ENST00000600287 670 ntBASIC18.89■□□□□ 0.61
SUSD3Q96L08 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.89■□□□□ 0.61
SUSD3Q96L08 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SUSD3Q96L08 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 AL049757.1-201ENST00000616842 1596 ntBASIC18.89■□□□□ 0.61
SUSD3Q96L08 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SUSD3Q96L08 AC009113.1-201ENST00000570267 2443 ntBASIC18.89■□□□□ 0.61
SUSD3Q96L08 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
SUSD3Q96L08 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SUSD3Q96L08 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SUSD3Q96L08 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 SIRPAP1-201ENST00000448467 1770 ntBASIC18.88■□□□□ 0.61
SUSD3Q96L08 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SUSD3Q96L08 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.88■□□□□ 0.61
SUSD3Q96L08 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.88■□□□□ 0.61
SUSD3Q96L08 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.88■□□□□ 0.61
SUSD3Q96L08 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.88■□□□□ 0.61
SUSD3Q96L08 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.88■□□□□ 0.61
SUSD3Q96L08 OR7E14P-202ENST00000530490 1290 ntBASIC18.88■□□□□ 0.61
SUSD3Q96L08 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.88■□□□□ 0.61
SUSD3Q96L08 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
SUSD3Q96L08 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SUSD3Q96L08 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SUSD3Q96L08 SIGLEC16-201ENST00000599858 1437 ntBASIC18.88■□□□□ 0.61
SUSD3Q96L08 AL353593.2-201ENST00000602529 1483 ntBASIC18.88■□□□□ 0.61
SUSD3Q96L08 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SUSD3Q96L08 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 AC009949.1-201ENST00000623048 1830 ntBASIC18.88■□□□□ 0.61
SUSD3Q96L08 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SUSD3Q96L08 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUSD3Q96L08 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUSD3Q96L08 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms