Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 PHGDH-209ENST00000641074 1780 ntBASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 ABCD1P5-201ENST00000445663 754 ntBASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 AC018712.1-201ENST00000455767 687 ntBASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 AP005117.1-201ENST00000584346 1413 ntBASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH3RF2Q8TEC5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 SCARNA2-201ENST00000458748 420 ntBASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3RF2Q8TEC5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 AC093010.1-201ENST00000473625 1624 ntBASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 IL9RP2-201ENST00000423948 1312 ntBASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms