Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 AL591684.3-201ENST00000605187 298 ntBASIC20.8■□□□□ 0.92
PNMA1Q8ND90 AL691432.3-201ENST00000621860 400 ntBASIC20.8■□□□□ 0.92
PNMA1Q8ND90 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PNMA1Q8ND90 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 AC009949.1-201ENST00000623048 1830 ntBASIC20.79■□□□□ 0.92
PNMA1Q8ND90 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 RN7SL510P-201ENST00000581311 263 ntBASIC20.79■□□□□ 0.92
PNMA1Q8ND90 LINC01711-201ENST00000598340 967 ntBASIC20.79■□□□□ 0.92
PNMA1Q8ND90 AL121894.2-201ENST00000602977 491 ntBASIC20.79■□□□□ 0.92
PNMA1Q8ND90 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PNMA1Q8ND90 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PNMA1Q8ND90 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.77■□□□□ 0.92
PNMA1Q8ND90 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
PNMA1Q8ND90 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.77■□□□□ 0.92
PNMA1Q8ND90 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PNMA1Q8ND90 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PNMA1Q8ND90 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PNMA1Q8ND90 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.77■□□□□ 0.92
PNMA1Q8ND90 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PNMA1Q8ND90 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PNMA1Q8ND90 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.77■□□□□ 0.92
PNMA1Q8ND90 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.77■□□□□ 0.92
PNMA1Q8ND90 EMBP1-201ENST00000458200 901 ntBASIC20.77■□□□□ 0.92
PNMA1Q8ND90 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.77■□□□□ 0.92
PNMA1Q8ND90 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms