Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNYL3P0C7X3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNYL3P0C7X3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNYL3P0C7X3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 BICD1-207ENST00000551848 1962 ntBASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 SERPINA7P1-201ENST00000443077 631 ntBASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNYL3P0C7X3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 NOC2LP1-202ENST00000452600 2235 ntBASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 AC126763.1-201ENST00000552015 2118 ntBASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 MINOS1P3-201ENST00000457048 203 ntBASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNYL3P0C7X3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNYL3P0C7X3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.28■□□□□ 0.36
CCNYL3P0C7X3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNYL3P0C7X3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.28■□□□□ 0.36
CCNYL3P0C7X3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNYL3P0C7X3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNYL3P0C7X3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms