Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 KRT18P48-201ENST00000434763 852 ntBASIC17.6■□□□□ 0.41
CDC7O00311 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.6■□□□□ 0.41
CDC7O00311 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.6■□□□□ 0.41
CDC7O00311 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.6■□□□□ 0.41
CDC7O00311 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.6■□□□□ 0.41
CDC7O00311 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.6■□□□□ 0.41
CDC7O00311 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.6■□□□□ 0.41
CDC7O00311 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
CDC7O00311 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.6■□□□□ 0.41
CDC7O00311 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDC7O00311 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDC7O00311 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC7O00311 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDC7O00311 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC7O00311 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDC7O00311 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.6■□□□□ 0.41
CDC7O00311 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC7O00311 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDC7O00311 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC7O00311 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDC7O00311 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.6■□□□□ 0.41
CDC7O00311 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.59■□□□□ 0.41
CDC7O00311 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CDC7O00311 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 FAM8A6P-201ENST00000407496 1135 ntBASIC17.59■□□□□ 0.41
CDC7O00311 KRT18P65-201ENST00000439811 1286 ntBASIC17.59■□□□□ 0.41
CDC7O00311 AC104076.2-201ENST00000448912 469 ntBASIC17.59■□□□□ 0.41
CDC7O00311 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.59■□□□□ 0.41
CDC7O00311 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.59■□□□□ 0.41
CDC7O00311 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CDC7O00311 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CDC7O00311 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.59■□□□□ 0.41
CDC7O00311 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC7O00311 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CDC7O00311 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDC7O00311 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDC7O00311 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDC7O00311 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.58■□□□□ 0.4
CDC7O00311 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 HBZP1-201ENST00000354915 429 ntBASIC17.58■□□□□ 0.4
CDC7O00311 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CDC7O00311 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CDC7O00311 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 AC112907.2-201ENST00000448639 330 ntBASIC17.58■□□□□ 0.4
CDC7O00311 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.58■□□□□ 0.4
CDC7O00311 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.58■□□□□ 0.4
CDC7O00311 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.58■□□□□ 0.4
CDC7O00311 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.58■□□□□ 0.4
CDC7O00311 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CDC7O00311 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 AC009949.1-201ENST00000623048 1830 ntBASIC17.58■□□□□ 0.4
CDC7O00311 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.58■□□□□ 0.4
CDC7O00311 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDC7O00311 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.58■□□□□ 0.4
CDC7O00311 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC7O00311 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDC7O00311 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.57■□□□□ 0.4
CDC7O00311 AC139713.2-201ENST00000641328 2723 ntBASIC17.57■□□□□ 0.4
CDC7O00311 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.57■□□□□ 0.4
CDC7O00311 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 KRT8P47-201ENST00000604727 1398 ntBASIC17.57■□□□□ 0.4
CDC7O00311 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.57■□□□□ 0.4
CDC7O00311 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDC7O00311 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms