Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC061975.6-201ENST00000579045 1553 ntBASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC01558Q9Y6Z2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 FXN-202ENST00000396364 980 ntTSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 KRT18P55-202ENST00000578578 1546 ntBASIC9.26□□□□□ -0.93
LINC01558Q9Y6Z2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms