Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 ZNF815P-204ENST00000434898 1737 ntBASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 AC009831.1-201ENST00000580420 1582 ntBASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 AC078925.2-201ENST00000624013 1973 ntBASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 MNT-208ENST00000575394 606 ntTSL 4 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 PPT1-215ENST00000641471 2368 ntBASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 FEM1AP3-201ENST00000403722 1741 ntBASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.35□□□□□ -0.75
CYSTM1Q9H1C7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms