Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 TSPY23P-201ENST00000440136 739 ntBASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 RPS2P52-201ENST00000469610 820 ntBASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 AC005837.3-201ENST00000612163 286 ntBASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 AC068587.9-201ENST00000641814 219 ntBASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 CYP2T1P-202ENST00000641596 2535 ntBASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 AC104640.1-201ENST00000562617 2109 ntBASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 AC024909.3-201ENST00000611513 2257 ntBASIC16.28■□□□□ 0.2
CROCCP3Q8IVE0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 NTF6G-201ENST00000591094 616 ntBASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 AC005181.1-201ENST00000604782 1256 ntBASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 AC132872.4-202ENST00000622924 2756 ntBASIC16.27■□□□□ 0.2
CROCCP3Q8IVE0 LINC02228-204ENST00000642115 2962 ntBASIC16.27■□□□□ 0.19
CROCCP3Q8IVE0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CROCCP3Q8IVE0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CROCCP3Q8IVE0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CROCCP3Q8IVE0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.27■□□□□ 0.19
CROCCP3Q8IVE0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CROCCP3Q8IVE0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CROCCP3Q8IVE0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CROCCP3Q8IVE0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.27■□□□□ 0.19
CROCCP3Q8IVE0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CROCCP3Q8IVE0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 AC006449.5-201ENST00000610658 2098 ntBASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms