Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HIST2H3AQ71DI3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 AC022898.2-201ENST00000616822 1312 ntBASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 KRT18P57-201ENST00000443599 1254 ntBASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 LINC00602-201ENST00000629776 2065 ntBASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST2H3AQ71DI3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 KRT18P38-201ENST00000449496 1282 ntBASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 AC092597.1-201ENST00000487352 616 ntBASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST2H3AQ71DI3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
HIST2H3AQ71DI3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
HIST2H3AQ71DI3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HIST2H3AQ71DI3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
HIST2H3AQ71DI3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIST2H3AQ71DI3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIST2H3AQ71DI3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HIST2H3AQ71DI3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIST2H3AQ71DI3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.77■□□□□ 0.11
HIST2H3AQ71DI3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
HIST2H3AQ71DI3 PKD1P1-201ENST00000458669 6805 ntBASIC15.77■□□□□ 0.11
HIST2H3AQ71DI3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 MIR662-201ENST00000384847 95 ntBASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 FAM8A6P-201ENST00000407496 1135 ntBASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 AK4P3-201ENST00000418260 669 ntBASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 KRT18P65-201ENST00000439811 1286 ntBASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.76■□□□□ 0.11
HIST2H3AQ71DI3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms