Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CDK3Q00526 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDK3Q00526 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 AC100803.2-201ENST00000562459 1963 ntBASIC17.62■□□□□ 0.41
CDK3Q00526 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK3Q00526 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK3Q00526 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK3Q00526 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDK3Q00526 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CDK3Q00526 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK3Q00526 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK3Q00526 BICD1-207ENST00000551848 1962 ntBASIC17.61■□□□□ 0.41
CDK3Q00526 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK3Q00526 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CDK3Q00526 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CDK3Q00526 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.61■□□□□ 0.41
CDK3Q00526 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK3Q00526 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK3Q00526 AL020996.1-203ENST00000536896 2307 ntBASIC17.61■□□□□ 0.41
CDK3Q00526 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK3Q00526 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDK3Q00526 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDK3Q00526 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDK3Q00526 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK3Q00526 AC010460.3-201ENST00000511359 1579 ntBASIC17.61■□□□□ 0.41
CDK3Q00526 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK3Q00526 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDK3Q00526 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK3Q00526 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK3Q00526 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK3Q00526 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CDK3Q00526 FAM220CP-201ENST00000395253 831 ntBASIC17.6■□□□□ 0.41
CDK3Q00526 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK3Q00526 AF238378.1-201ENST00000526806 358 ntBASIC17.6■□□□□ 0.41
CDK3Q00526 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.6■□□□□ 0.41
CDK3Q00526 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CDK3Q00526 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.6■□□□□ 0.41
CDK3Q00526 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.6■□□□□ 0.41
CDK3Q00526 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.6■□□□□ 0.41
CDK3Q00526 AL121912.1-201ENST00000603683 238 ntBASIC17.6■□□□□ 0.41
CDK3Q00526 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDK3Q00526 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDK3Q00526 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.6■□□□□ 0.41
CDK3Q00526 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDK3Q00526 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK3Q00526 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK3Q00526 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK3Q00526 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK3Q00526 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK3Q00526 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.59■□□□□ 0.41
CDK3Q00526 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK3Q00526 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CDK3Q00526 ABALON-201ENST00000629058 1903 ntBASIC17.59■□□□□ 0.41
CDK3Q00526 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK3Q00526 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK3Q00526 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK3Q00526 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK3Q00526 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK3Q00526 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK3Q00526 FLJ13224-201ENST00000313737 1514 ntBASIC17.59■□□□□ 0.41
CDK3Q00526 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.59■□□□□ 0.41
CDK3Q00526 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK3Q00526 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.59■□□□□ 0.41
CDK3Q00526 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK3Q00526 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.59■□□□□ 0.41
CDK3Q00526 AC104692.2-201ENST00000603054 253 ntBASIC17.59■□□□□ 0.41
CDK3Q00526 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK3Q00526 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK3Q00526 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms