Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CLDN20P56880 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN20P56880 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN20P56880 RNF126P1-202ENST00000569893 925 ntBASIC16.46■□□□□ 0.23
CLDN20P56880 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN20P56880 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN20P56880 AC011498.5-201ENST00000592027 486 ntBASIC16.46■□□□□ 0.23
CLDN20P56880 AC024563.2-201ENST00000603282 481 ntBASIC16.46■□□□□ 0.23
CLDN20P56880 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN20P56880 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CLDN20P56880 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN20P56880 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN20P56880 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN20P56880 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN20P56880 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN20P56880 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CLDN20P56880 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN20P56880 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 HTR7P1-202ENST00000624664 4411 ntBASIC16.45■□□□□ 0.22
CLDN20P56880 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN20P56880 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CLDN20P56880 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN20P56880 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN20P56880 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN20P56880 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN20P56880 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN20P56880 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN20P56880 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN20P56880 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CLDN20P56880 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN20P56880 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN20P56880 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN20P56880 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN20P56880 KRT18P48-201ENST00000434763 852 ntBASIC16.44■□□□□ 0.22
CLDN20P56880 AP003733.1-201ENST00000491725 852 ntBASIC16.44■□□□□ 0.22
CLDN20P56880 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN20P56880 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.44■□□□□ 0.22
CLDN20P56880 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
CLDN20P56880 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN20P56880 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN20P56880 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN20P56880 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CLDN20P56880 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN20P56880 AL024508.2-201ENST00000607749 1894 ntBASIC16.44■□□□□ 0.22
CLDN20P56880 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN20P56880 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN20P56880 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN20P56880 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN20P56880 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLDN20P56880 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN20P56880 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms