Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
FOXG1P55316 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FOXG1P55316 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXG1P55316 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
FOXG1P55316 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
FOXG1P55316 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXG1P55316 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 AC125634.1-201ENST00000438758 1403 ntBASIC15.72■□□□□ 0.11
FOXG1P55316 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
FOXG1P55316 NUS1P1-201ENST00000446295 882 ntBASIC15.72■□□□□ 0.11
FOXG1P55316 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 MINOS1P3-201ENST00000457048 203 ntBASIC15.72■□□□□ 0.11
FOXG1P55316 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXG1P55316 UNC93B7-201ENST00000509439 705 ntBASIC15.72■□□□□ 0.11
FOXG1P55316 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXG1P55316 AL138831.2-201ENST00000606564 490 ntBASIC15.72■□□□□ 0.11
FOXG1P55316 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FOXG1P55316 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXG1P55316 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXG1P55316 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXG1P55316 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXG1P55316 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXG1P55316 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXG1P55316 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXG1P55316 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
FOXG1P55316 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXG1P55316 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXG1P55316 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXG1P55316 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXG1P55316 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXG1P55316 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXG1P55316 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
FOXG1P55316 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXG1P55316 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXG1P55316 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXG1P55316 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.71■□□□□ 0.11
FOXG1P55316 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXG1P55316 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXG1P55316 FLJ13224-201ENST00000313737 1514 ntBASIC15.71■□□□□ 0.11
FOXG1P55316 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXG1P55316 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXG1P55316 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXG1P55316 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXG1P55316 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.71■□□□□ 0.1
FOXG1P55316 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.71■□□□□ 0.1
FOXG1P55316 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
FOXG1P55316 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXG1P55316 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXG1P55316 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXG1P55316 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FOXG1P55316 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXG1P55316 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXG1P55316 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXG1P55316 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXG1P55316 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
FOXG1P55316 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
FOXG1P55316 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXG1P55316 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FOXG1P55316 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXG1P55316 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXG1P55316 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
FOXG1P55316 NUS1P2-201ENST00000417358 873 ntBASIC15.7■□□□□ 0.1
FOXG1P55316 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXG1P55316 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXG1P55316 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
FOXG1P55316 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXG1P55316 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXG1P55316 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXG1P55316 KRT126P-201ENST00000549467 1181 ntBASIC15.7■□□□□ 0.1
FOXG1P55316 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXG1P55316 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXG1P55316 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXG1P55316 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXG1P55316 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXG1P55316 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
FOXG1P55316 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
FOXG1P55316 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXG1P55316 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXG1P55316 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXG1P55316 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXG1P55316 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXG1P55316 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXG1P55316 AC022898.2-201ENST00000616822 1312 ntBASIC15.69■□□□□ 0.1
FOXG1P55316 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms