Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
THBS1P07996 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
THBS1P07996 AC011558.1-201ENST00000623459 338 ntBASIC16.53■□□□□ 0.24
THBS1P07996 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.53■□□□□ 0.24
THBS1P07996 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
THBS1P07996 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 AC020916.1-201ENST00000587762 1774 ntBASIC16.53■□□□□ 0.24
THBS1P07996 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
THBS1P07996 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.53■□□□□ 0.24
THBS1P07996 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.52■□□□□ 0.24
THBS1P07996 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.52■□□□□ 0.24
THBS1P07996 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
THBS1P07996 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.52■□□□□ 0.24
THBS1P07996 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
THBS1P07996 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 KRT18P48-201ENST00000434763 852 ntBASIC16.52■□□□□ 0.24
THBS1P07996 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.52■□□□□ 0.24
THBS1P07996 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THBS1P07996 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
THBS1P07996 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.52■□□□□ 0.24
THBS1P07996 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.52■□□□□ 0.24
THBS1P07996 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.52■□□□□ 0.24
THBS1P07996 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
THBS1P07996 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
THBS1P07996 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
THBS1P07996 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
THBS1P07996 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
THBS1P07996 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
THBS1P07996 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
THBS1P07996 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.52■□□□□ 0.23
THBS1P07996 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.52■□□□□ 0.23
THBS1P07996 AC133963.1-201ENST00000504166 1679 ntBASIC16.52■□□□□ 0.23
THBS1P07996 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
THBS1P07996 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.52■□□□□ 0.23
THBS1P07996 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
THBS1P07996 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
THBS1P07996 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
THBS1P07996 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
THBS1P07996 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
THBS1P07996 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.51■□□□□ 0.23
THBS1P07996 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.51■□□□□ 0.23
THBS1P07996 DDX43P3-201ENST00000441064 443 ntBASIC16.51■□□□□ 0.23
THBS1P07996 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.51■□□□□ 0.23
THBS1P07996 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 AC139887.4-201ENST00000607877 719 ntBASIC16.51■□□□□ 0.23
THBS1P07996 AC009154.2-201ENST00000621177 724 ntBASIC16.51■□□□□ 0.23
THBS1P07996 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.51■□□□□ 0.23
THBS1P07996 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
THBS1P07996 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.51■□□□□ 0.23
THBS1P07996 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.5■□□□□ 0.23
THBS1P07996 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.5■□□□□ 0.23
THBS1P07996 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms